DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GC2 and MME1

DIOPT Version :10

Sequence 1:NP_731657.2 Gene:GC2 / 41449 FlyBaseID:FBgn0037970 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_013889.1 Gene:MME1 / 855202 SGDID:S000004776 Length:368 Species:Saccharomyces cerevisiae


Alignment Length:292 Identity:76/292 - (26%)
Similarity:125/292 - (42%) Gaps:45/292 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 IINGGVAGIIGVACVYPLDMVKTRLQNQTIGPNGERMYTSIADCFRKTIASEGY-FGMYRGSAVN 87
            :::||:.|.||.:.::.||.||||.|.   .||.:: |.::...:|.....||. .|:|.|....
Yeast    57 VVSGGIGGKIGDSAMHSLDTVKTRQQG---APNVKK-YRNMISAYRTIWLEEGVRRGLYGGYMAA 117

  Fly    88 IVLITPEKAIKLTANDFFRYHLASD----DGVIPLSRATLAGGLAGLFQIVVTTPMELLKIQMQD 148
            ::...|..||.....::.:..:..|    |.:..||    ||.|.......|..|.|:||.::|.
Yeast   118 MLGSFPSAAIFFGTYEYTKRTMIEDWQINDTITHLS----AGFLGDFISSFVYVPSEVLKTRLQL 178

  Fly   149 AGRVAAADRAAGREVKTITALGLTKTLLRERGIFGLYKGVGATGVRDITFSMVYFPL------MA 207
            .||.......:|.....:.  ...||:::|.|...|:.|..||..||:.||.:.|..      :|
Yeast   179 QGRFNNPFFQSGYNYSNLR--NAIKTVIKEEGFRSLFFGYKATLARDLPFSALQFAFYEKFRQLA 241

  Fly   208 WINDQGPRKSDGSGEAVFYWSLIAGLLSGMTSAFMVTPFDVVKTRLQ-----ADGEKKFK----- 262
            :..:|   |....||......::.|..:|..:..:.||.||||||:|     :...|.:.     
Yeast   242 FKIEQ---KDGRDGELSIPNEILTGACAGGLAGIITTPMDVVKTRVQTQQPPSQSNKSYSVTHPH 303

  Fly   263 -------GIMDCVNRTLK----EEGISAFFKG 283
                   .:.:.::.:|:    .||:..||.|
Yeast   304 VTNGRPAALSNSISLSLRTVYQSEGVLGFFSG 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GC2NP_731657.2 Mito_carr 16..106 CDD:395101 24/82 (29%)
Mito_carr 123..203 CDD:395101 24/79 (30%)
Mito_carr 228..302 CDD:395101 18/77 (23%)
MME1NP_013889.1 Mito_carr 51..142 CDD:395101 24/88 (27%)
PTZ00168 55..>283 CDD:185494 66/238 (28%)
Mito_carr 252..363 CDD:395101 20/84 (24%)

Return to query results.
Submit another query.