DRSC/TRiP Functional Genomics Resources

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Protein Alignment GC2 and YIA6

DIOPT Version :10

Sequence 1:NP_731657.2 Gene:GC2 / 41449 FlyBaseID:FBgn0037970 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_012260.1 Gene:YIA6 / 854811 SGDID:S000001268 Length:373 Species:Saccharomyces cerevisiae


Alignment Length:252 Identity:55/252 - (21%)
Similarity:96/252 - (38%) Gaps:75/252 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 LITPEKAIKLTANDF---FRYHLASDDGV--------IPLSR---ATLAGGLAGLFQIVVTTPME 140
            ||.|:.:.:|::.|.   .:.:.:::..:        :|||.   ..|:|..||....|...|::
Yeast    35 LIFPDHSSQLSSADIIEPIKMNSSTESIIGTTLRKKWVPLSSTQITALSGAFAGFLSGVAVCPLD 99

  Fly   141 LLKIQMQDAGRVAAADRAAGREVKTITALGLTKTLLRERGIFGLYKGVGATGVRDITFSMVYFPL 205
            :.|.::|..|.....:....|.:     :|...|::|:.|..|||||:       :...:.||| 
Yeast   100 VAKTRLQAQGLQTRFENPYYRGI-----MGTLSTIVRDEGPRGLYKGL-------VPIVLGYFP- 151

  Fly   206 MAWINDQGPRKSDGSGEAVFYWSL---------------------IAGLLSGMTSAFMVTPFDVV 249
             .|               :.|:|:                     .|.:.:|..|..:..|..||
Yeast   152 -TW---------------MIYFSVYEFSKKFFHGIFPQFDFVAQSCAAITAGAASTTLTNPIWVV 200

  Fly   250 KTRLQAD---GE--KKFKGIMDCVNRTLKEEGISAFFKG------GLCRIMVLAPLF 295
            ||||...   ||  ..:||..|...:...:||..|.:.|      ||..:.:..|::
Yeast   201 KTRLMLQSNLGEHPTHYKGTFDAFRKLFYQEGFKALYAGLVPSLLGLFHVAIHFPIY 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GC2NP_731657.2 Mito_carr 16..106 CDD:395101 5/18 (28%)
Mito_carr 123..203 CDD:395101 19/79 (24%)
Mito_carr 228..302 CDD:395101 23/100 (23%)
YIA6NP_012260.1 Mito_carr 75..171 CDD:395101 26/124 (21%)
Mito_carr 176..268 CDD:395101 22/82 (27%)
Mito_carr 274..365 CDD:395101
Blue background indicates that the domain is not in the aligned region.

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