DRSC/TRiP Functional Genomics Resources

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Protein Alignment GC2 and Slc25a4

DIOPT Version :10

Sequence 1:NP_731657.2 Gene:GC2 / 41449 FlyBaseID:FBgn0037970 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_445967.2 Gene:Slc25a4 / 85333 RGDID:620352 Length:298 Species:Rattus norvegicus


Alignment Length:309 Identity:76/309 - (24%)
Similarity:125/309 - (40%) Gaps:68/309 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 QKFNVFPKIINGGVAGIIGVACVYPLDMVKTRLQNQTIGP--NGERMYTSIADCFRKTIASEGYF 78
            |..:.....:.||:|..:....|.|::.||..||.|....  :.|:.|..|.||..:....:|:.
  Rat     4 QALSFLKDFLAGGIAAAVSKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFL 68

  Fly    79 GMYRGSAVNIVLITPEKAIKLTAND---------------FFRY---HLASDDGVIPLSRATLAG 125
            ..:||:..|::...|.:|:.....|               |:||   :|||             |
  Rat    69 SFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLAS-------------G 120

  Fly   126 GLAGLFQIVVTTPMELLKIQMQDAGRVAAADRAAGREVKTITALG--LTKTLLRERGIFGLYKG- 187
            |.||...:....|::..:.::       |||...|...:....||  ||| :.:..|:.|||:| 
  Rat   121 GAAGATSLCFVYPLDFARTRL-------AADVGKGSSQREFNGLGDCLTK-IFKSDGLKGLYQGF 177

  Fly   188 -VGATGVRDITFSMVYFPLMAWINDQGPRKSDGSGEAVFYWSL------IAGLLSGMTSAFMVTP 245
             |...|:  |.:...||.:  :...:|......:...:..|.:      :|||:|        .|
  Rat   178 SVSVQGI--IIYRAAYFGV--YDTAKGMLPDPKNVHIIVSWMIAQSVTAVAGLVS--------YP 230

  Fly   246 FDVVKTRLQADGEKK-----FKGIMDCVNRTLKEEGISAFFKGGLCRIM 289
            ||.|:.|:.....:|     :.|.:||..:..|:||..|||||....::
  Rat   231 FDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGAKAFFKGAWSNVL 279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GC2NP_731657.2 Mito_carr 16..106 CDD:395101 24/106 (23%)
Mito_carr 123..203 CDD:395101 22/83 (27%)
Mito_carr 228..302 CDD:395101 21/73 (29%)
Slc25a4NP_445967.2 PTZ00169 2..298 CDD:240302 76/309 (25%)
Solcar 1 6..98 22/91 (24%)
Solcar 2 111..201 29/114 (25%)
Solcar 3 212..297 22/76 (29%)
Important for transport activity. /evidence=ECO:0000250|UniProtKB:P12235 235..240 1/4 (25%)
Nucleotide carrier signature motif. /evidence=ECO:0000250|UniProtKB:P02722 235..240 1/4 (25%)

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