DRSC/TRiP Functional Genomics Resources

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Protein Alignment GC2 and YMC2

DIOPT Version :10

Sequence 1:NP_731657.2 Gene:GC2 / 41449 FlyBaseID:FBgn0037970 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_009662.3 Gene:YMC2 / 852401 SGDID:S000000308 Length:329 Species:Saccharomyces cerevisiae


Alignment Length:350 Identity:84/350 - (24%)
Similarity:145/350 - (41%) Gaps:77/350 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLEQVEQKNQ-----EQKKPQKFNVFPKIINGGVAGIIGVACVYPLDMVKTRLQNQTIGPNGERM 60
            :|:::|.:.:     |:::.....|...|..|.:.||..|....|.|..|.|||..|       .
Yeast    10 LLDELEDQQKVTTPNEKRELSSNRVLKDIFAGTIGGIAQVLVGQPFDTTKVRLQTAT-------T 67

  Fly    61 YTSIADCFRKTIASEGYFGMYRGSAVNI----VLITPEKAIKLTANDFFRYHLASDD-------- 113
            .|:..:..|..:.:||.|..|:|:...:    :.::.:..:......||:.:.||.:        
Yeast    68 RTTTLEVLRNLVKNEGVFAFYKGALTPLLGVGICVSVQFGVNEAMKRFFQNYNASKNPNMSSQDV 132

  Fly   114 -----GVIPLSRATLAGGLAGLFQIVVTTPMELLKIQMQDAGRVAAADRAAGRE-------VKTI 166
                 ..:|||:..:.|...|:....:.:|:|.::|::|     ........||       :|.:
Yeast   133 DLSRSNTLPLSQYYVCGLTGGVVNSFLASPIEQIRIRLQ-----TQTSNGGDREFKGPWDCIKKL 192

  Fly   167 TALGLTKTLLRERGIFGLYKGVGATGVRD----ITFSMVYFPLMAWINDQGPRKSDGSG---EAV 224
            .|.|            ||.:|:..|.:|.    .|:.:||..|:|        :..|:|   ..:
Yeast   193 KAQG------------GLMRGLFPTMIRAGHGLGTYFLVYEALVA--------REIGTGLTRNEI 237

  Fly   225 FYWSL-IAGLLSGMTSAFMVTPFDVVKTRLQADG--EKKFKGIMDCVNRTL-KEEGISAFFKGGL 285
            ..|.| :.|..||......|.|.||||:.:|.|.  :.|:|..:..|.:|: .:|||.|||||..
Yeast   238 PPWKLCLFGAFSGTMLWLTVYPLDVVKSIIQNDDLRKPKYKNSISYVAKTIYAKEGIRAFFKGFG 302

  Fly   286 CRIMVLAPLFGIAQMFY-----FLG 305
            ..::..||:.|...:.:     |||
Yeast   303 PTMVRSAPVNGATFLTFELVMRFLG 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GC2NP_731657.2 Mito_carr 16..106 CDD:395101 21/93 (23%)
Mito_carr 123..203 CDD:395101 18/90 (20%)
Mito_carr 228..302 CDD:395101 27/77 (35%)
YMC2NP_009662.3 Mito_carr 34..120 CDD:395101 22/92 (24%)
Mito_carr 138..223 CDD:395101 22/101 (22%)
Mito_carr 235..328 CDD:395101 30/92 (33%)

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