DRSC/TRiP Functional Genomics Resources

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Protein Alignment GC2 and MRX20

DIOPT Version :10

Sequence 1:NP_731657.2 Gene:GC2 / 41449 FlyBaseID:FBgn0037970 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_116703.5 Gene:MRX20 / 850606 SGDID:S000001941 Length:309 Species:Saccharomyces cerevisiae


Alignment Length:334 Identity:78/334 - (23%)
Similarity:127/334 - (38%) Gaps:88/334 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 QKFNVFPKIINGGVAGIIGVACVYPLDMVKTRLQNQTIGPNGERMYTSIADCFRKTIASEGYF-G 79
            |..:::.:|..|.||.:......||.:.:||.||.|..|...|.:...|          :.|| |
Yeast     4 QNSDLYKQITAGSVAAVFQTTMTYPFEYLKTGLQLQPKGTAFEIILPQI----------KSYFVG 58

  Fly    80 MYRGSAVNIV--------LITPEKAI-----KLTANDFFR----YHLASDDGVIPLSRATLAGGL 127
            .   ||:|:.        .:|.:|..     .:..||.|:    |:|            .:||.|
Yeast    59 C---SALNVAAFGKTILRFVTFDKLCHSLNNNIDNNDNFQRLTGYNL------------LIAGTL 108

  Fly   128 AGLFQIVVTTPMELLKIQMQDAG---------------------RVAAADRAAGREVKTITALGL 171
            .|:.:.:...|.|.:|..:..:.                     :||.......|..|.:.|:  
Yeast   109 TGIVESLFIIPFENIKTTLIQSAMIDHKKLEKNQPVVNAKATFHKVATKSTPVARIEKLLPAV-- 171

  Fly   172 TKTLLRERGIFGLYKGVGATGVRDITFSMVYFP-------LMAWINDQGPRKSDGSGEAVFYWSL 229
             |.:.:.||.....:|..||..|.|..:.:.|.       |:...||:..             |:
Yeast   172 -KHMYQTRGPAAFVQGTTATIFRQIANTSIQFTAYTAFKRLLQARNDKAS-------------SV 222

  Fly   230 IAGLLSGMTSAFMVTPFDVVKTRLQADGEK-KFKGIMDCVNRTLKEEGISAFFKGGLCRIMVLAP 293
            |.||.:..|...|..|.||||||:.:...| ::|..::|:.|...:||::.|:||.:.|.|.:..
Yeast   223 ITGLATSFTLVAMTQPIDVVKTRMMSQNAKTEYKNTLNCMYRIFVQEGMATFWKGSIFRFMKVGI 287

  Fly   294 LFGIAQMFY 302
            ..|:....|
Yeast   288 SGGLTFTVY 296

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GC2NP_731657.2 Mito_carr 16..106 CDD:395101 25/103 (24%)
Mito_carr 123..203 CDD:395101 20/100 (20%)
Mito_carr 228..302 CDD:395101 25/74 (34%)
MRX20NP_116703.5 Mito_carr 8..80 CDD:395101 21/84 (25%)
Mito_carr 95..213 CDD:395101 24/132 (18%)
Mito_carr 219..307 CDD:395101 26/91 (29%)

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