DRSC/TRiP Functional Genomics Resources

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Protein Alignment GC2 and ucp1

DIOPT Version :10

Sequence 1:NP_731657.2 Gene:GC2 / 41449 FlyBaseID:FBgn0037970 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_955817.1 Gene:ucp1 / 83908 ZFINID:ZDB-GENE-010503-1 Length:309 Species:Danio rerio


Alignment Length:177 Identity:50/177 - (28%)
Similarity:77/177 - (43%) Gaps:10/177 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 PLSRATLAGGLAGLFQIVVTTPMELLKIQMQDAGRVAAADRAAGREVKTITALGLTKTLLRERGI 181
            ||:...|:.|.|.....:||.|::..|:::|..|..|....|.|...|.:  .|...|::|..|.
Zfish    12 PLTVKVLSAGTAACIADLVTFPLDTAKVRLQIQGEKAVTGAAKGIRYKGV--FGTISTMMRTEGP 74

  Fly   182 FGLYKGVGATGVRDITFSMVYFPLMAWINDQGPRKSDGSGEAVFYWSLIAGLLSGMTSAFMVTPF 246
            ..||.|:.|...|.:.|:.:...|...:.....|..|....||   .::||..:|..:..|..|.
Zfish    75 RSLYNGLVAGLQRQMAFASIRIGLYDNVKSFYTRGKDNPNVAV---RILAGCTTGAMAVSMAQPT 136

  Fly   247 DVVKTRLQADGE-----KKFKGIMDCVNRTLKEEGISAFFKGGLCRI 288
            ||||.|.||...     :::.|.|....:..:.||:...:||.|..|
Zfish   137 DVVKVRFQAQMNLQGVGRRYNGTMQAYRQIFQLEGLRGLWKGTLPNI 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GC2NP_731657.2 Mito_carr 16..106 CDD:395101
Mito_carr 123..203 CDD:395101 23/79 (29%)
Mito_carr 228..302 CDD:395101 20/66 (30%)
ucp1NP_955817.1 Mito_carr 10..110 CDD:395101 27/99 (27%)
Mito_carr 111..208 CDD:395101 23/76 (30%)
Mito_carr 213..299 CDD:395101
Blue background indicates that the domain is not in the aligned region.

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