DRSC/TRiP Functional Genomics Resources

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Protein Alignment GC2 and mSFC1

DIOPT Version :10

Sequence 1:NP_731657.2 Gene:GC2 / 41449 FlyBaseID:FBgn0037970 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_195754.1 Gene:mSFC1 / 831479 AraportID:AT5G01340 Length:309 Species:Arabidopsis thaliana


Alignment Length:328 Identity:91/328 - (27%)
Similarity:159/328 - (48%) Gaps:45/328 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLEQVEQKNQEQKKPQKFNVFPKIINGGVAGIIGVACVYPLDMVKTRLQNQTIGPNGERMYTSIA 65
            |..:.|.|.|       ...:.|.::|.:.|::...|:.|:|::|||||...:|     .|..||
plant     1 MATRTESKKQ-------IPPYMKAVSGSLGGVVEACCLQPIDVIKTRLQLDRVG-----AYKGIA 53

  Fly    66 DCFRKTIASEGYFGMYRGSAVNIVLITPEKAIKLTANDFFRYHLA-SDDGVIPLSRATLAGGLAG 129
            .|..|.:.:||...:::|.......:|.:..:::.:|..|:.... |:.|.:......|:|..||
plant    54 HCGSKVVRTEGVRALWKGLTPFATHLTLKYTLRMGSNAMFQTAFKDSETGKVSNRGRFLSGFGAG 118

  Fly   130 LFQ-IVVTTPMELLKIQMQDAGRVAAADRAAGREV-KTITALGLTKTLLRERGIFGLYKGVGATG 192
            :.: :.:.||.|::||::|.       .:....|: |....:...:|::||..|.||:.|...|.
plant   119 VLEALAIVTPFEVVKIRLQQ-------QKGLSPELFKYKGPIHCARTIVREESILGLWSGAAPTV 176

  Fly   193 VRDITFSMVY------FPLMAWINDQGPRKSDGSGEAVFYW-SLIAGLLSGMTSAFMVTPFDVVK 250
            :|:.|...|.      |.::.|      .|.:|.|:.:..| |:|:|.|:|....|...||||||
plant   177 MRNGTNQAVMFTAKNAFDILLW------NKHEGDGKILQPWQSMISGFLAGTAGPFCTGPFDVVK 235

  Fly   251 TRLQA-----DGEKKFKGIMDCVNRTLKEEGISAFFKGGLCRIMVLAPLFGIAQMFYFLGVGEKI 310
            |||.|     :|..::||::..:.....|||:.|.::|.|.|:|.:.|  |.|.|:   .|.:::
plant   236 TRLMAQSRDSEGGIRYKGMVHAIRTIYAEEGLVALWRGLLPRLMRIPP--GQAIMW---AVADQV 295

  Fly   311 LGI 313
            .|:
plant   296 TGL 298

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GC2NP_731657.2 Mito_carr 16..106 CDD:395101 22/89 (25%)
Mito_carr 123..203 CDD:395101 23/87 (26%)
Mito_carr 228..302 CDD:395101 31/78 (40%)
mSFC1NP_195754.1 Mito_carr 9..>74 CDD:395101 21/76 (28%)
Mito_carr 103..200 CDD:395101 26/109 (24%)
Mito_carr 210..295 CDD:395101 33/89 (37%)

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