DRSC/TRiP Functional Genomics Resources

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Protein Alignment GC2 and Slc25a18

DIOPT Version :9

Sequence 1:NP_731657.2 Gene:GC2 / 41449 FlyBaseID:FBgn0037970 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_001037745.2 Gene:Slc25a18 / 681896 RGDID:1590470 Length:320 Species:Rattus norvegicus


Alignment Length:314 Identity:151/314 - (48%)
Similarity:203/314 - (64%) Gaps:24/314 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 QKFNVFPKIINGGVAGIIGVACVYPLDMVKTRLQNQTIGPNGERMYTSIADCFRKTIASEGYFGM 80
            |..::..|:||||:||::||.||:|:|:.|||||||    .|:.:|..:.||..||..:||:.||
  Rat     9 QDLSITAKLINGGIAGLVGVTCVFPIDLAKTRLQNQ----QGKDVYKGMTDCLVKTARAEGFLGM 69

  Fly    81 YRGSAVNIVLITPEKAIKLTANDFFRYHLASDDGVIPLSRATLAGGLAGLFQIVVTTPMELLKIQ 145
            |||:|||:.|:||||||||.||||.|..|..|.....|....|||..||:.|:|:|.|||:||||
  Rat    70 YRGAAVNLTLVTPEKAIKLAANDFLRQLLMQDGTQRNLKMEMLAGCGAGICQVVITCPMEMLKIQ 134

  Fly   146 MQDAGRVAAADRAAGREVKTIT--ALGLTKT------------LLRERGIFGLYKGVGATGVRDI 196
            :|||||:|...:|:.....|..  :.|.|.|            |||.:|:.|||:|:|||.:|||
  Rat   135 LQDAGRLAVCQQASASATPTSRPYSTGSTSTHRRPSATLIAWELLRTQGLSGLYRGLGATLLRDI 199

  Fly   197 TFSMVYFPLMAWINDQGPRKSDGSGEAVFYWSLIAGLLSGMTSAFMVTPFDVVKTRLQ----ADG 257
            .||::||||.|.:|..|  .|:.:|:|.|..|.:||..:|..||..|||.||:|||:|    ..|
  Rat   200 PFSIIYFPLFANLNQLG--VSELTGKASFTHSFVAGCAAGSVSAVAVTPLDVLKTRIQTLKKGLG 262

  Fly   258 EKKFKGIMDCVNRTLKEEGISAFFKGGLCRIMVLAPLFGIAQMFYFLGVGEKIL 311
            |..::|:.||..:...:||.:||.||..||.:|:||||||||..||:|:||:||
  Rat   263 EDTYRGVTDCARKLWTQEGAAAFMKGAGCRALVIAPLFGIAQGVYFIGIGERIL 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GC2NP_731657.2 PTZ00169 14..289 CDD:240302 135/290 (47%)
Mito_carr 16..106 CDD:278578 50/89 (56%)
Mito_carr 123..203 CDD:278578 42/93 (45%)
Mito_carr 228..302 CDD:278578 37/77 (48%)
Slc25a18NP_001037745.2 Mito_carr 9..102 CDD:395101 52/96 (54%)
Solcar 1 11..97 50/89 (56%)
Solcar 2 105..215 49/109 (45%)
Mito_carr 111..209 CDD:395101 45/97 (46%)
Mito_carr 222..307 CDD:395101 40/84 (48%)
Solcar 3 224..313 42/88 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 137 1.000 Domainoid score I4758
eggNOG 1 0.900 - - E1_KOG0750
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 353 1.000 Inparanoid score I2180
OMA 1 1.010 - - QHG53612
OrthoDB 1 1.010 - - D458796at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8923
orthoMCL 1 0.900 - - OOG6_104895
Panther 1 1.100 - - O PTHR45678
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X982
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1312.840

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