DRSC/TRiP Functional Genomics Resources

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Protein Alignment GC2 and slc25a29

DIOPT Version :9

Sequence 1:NP_731657.2 Gene:GC2 / 41449 FlyBaseID:FBgn0037970 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_001025408.1 Gene:slc25a29 / 569608 ZFINID:ZDB-GENE-050913-70 Length:305 Species:Danio rerio


Alignment Length:298 Identity:84/298 - (28%)
Similarity:129/298 - (43%) Gaps:51/298 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 GGVAGIIGVACVYPLDMVKTRLQNQTIGPNGERMYTSIADCFRKTIASEGYFGMYRGSAVNIVLI 91
            |.:.|..||...:|.|.||.|||.|::   .:.:|.....||:..|..|...|:|:|....::.:
Zfish     6 GCIGGAAGVLVGHPFDTVKVRLQVQSV---YKPLYRGTFHCFQSIIRQESVLGLYKGIGSPMMGL 67

  Fly    92 TPEKAIKLTANDFFRYHLASDDGVIPLSRATLAGGLAGLFQIVVTTPMELLKIQMQDAGRVAAAD 156
            |...||...........|..|   .||:: .|||..||..|.|:..||||.|.:||..|  ....
Zfish    68 TFINAIVFGVQGNAMRRLGED---TPLNQ-FLAGAAAGSIQCVICCPMELAKTRMQMQG--TGEK 126

  Fly   157 RAAGREVKTITALGLTKTLLRERGIFGLYKGVGATGVRDITFSMVYF----------------PL 205
            :::.|:|.. .:|.....:.:..|:.|:.:|:..|.:|:.....|||                |.
Zfish   127 KSSSRKVYK-NSLDCLARIYQREGLRGVNRGMVTTLIRETPGFGVYFLAYDLLTRSLGCEPDDPY 190

  Fly   206 MAWINDQGPRKSDGSGEAVFYWSLIAGLLSGMTSAFMVTPFDVVKTRLQAD---GEKKFKGIMDC 267
            |.      |:            .|.||.:||:.|.....|.||:|:|||||   |:.::..||||
Zfish   191 MI------PK------------LLFAGGMSGIASWLSTYPVDVIKSRLQADGVGGKYQYSSIMDC 237

  Fly   268 VNRTLKEEGISAFFKGGLCRIM----VLAPLFGIAQMF 301
            ..::::.||...|.:|....::    |.|..|....:|
Zfish   238 TRKSIQREGFRVFTRGLTSTLLRAFPVNAATFATVTLF 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GC2NP_731657.2 PTZ00169 14..289 CDD:240302 80/280 (29%)
Mito_carr 16..106 CDD:278578 23/78 (29%)
Mito_carr 123..203 CDD:278578 24/79 (30%)
Mito_carr 228..302 CDD:278578 28/81 (35%)
slc25a29NP_001025408.1 PTZ00169 2..262 CDD:240302 80/283 (28%)
Mito_carr 2..77 CDD:278578 23/73 (32%)
Mito_carr 86..183 CDD:278578 29/103 (28%)
Mito_carr 192..271 CDD:278578 28/96 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0762
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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