DRSC/TRiP Functional Genomics Resources

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Protein Alignment GC2 and MGC108450

DIOPT Version :10

Sequence 1:NP_731657.2 Gene:GC2 / 41449 FlyBaseID:FBgn0037970 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_001015800.1 Gene:MGC108450 / 548517 XenbaseID:XB-GENE-29099143 Length:301 Species:Xenopus tropicalis


Alignment Length:279 Identity:70/279 - (25%)
Similarity:116/279 - (41%) Gaps:42/279 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 INGGVAGIIGVACV---YPLDMVKTRLQNQTIGPNGERMYTSIADCFRKTIASEGYFGMYRGSAV 86
            :..|.||  |.|||   .|.|..|.::|.   .|:   :|..:.||..||....|..|.|:|::.
 Frog    13 LTAGAAG--GTACVLTGQPFDTAKVKMQT---FPS---LYRGLMDCAVKTYKQMGLTGFYKGTSP 69

  Fly    87 NIVLITPEKAIKLTANDFFR------YHLASDDGVIPLSRATLAGGLAGLFQIVVTTPMELLKIQ 145
            .::....|.::...:..|.:      ..|..:..:..|..|| ||..|..|..:...|.||:|.:
 Frog    70 ALLANISENSVLFMSYGFCQK
AVRRIVGLDKNAELNDLHNAT-AGSFAAAFAALALCPTELVKCR 133

  Fly   146 MQD------AGRVAAADRAAGREVKTITALGLTKTLLRERGIFGLYKGVGATGVRDITFSMVYFP 204
            :|.      :|:|.....         |...:.|::||..|..|.|.|:.:|.:|::.....:|.
 Frog   134 LQAMHEMTLSGKVTVGQN---------TVWSVVKSILRTDGPMGFYHGLSSTMLREVPGYFFFFG 189

  Fly   205 ----LMAWINDQGPRKSDGSGEAVFYWSLIAGLLSGMTSAFMVTPFDVVKTRLQA-DGEKKFKGI 264
                ..:.....|..|.|.....:    :|:|.:.|::...:|.|.|.||:|:|. ....|..|.
 Frog   190 GYELSRSCFVTTGKTKDDLGIVPL----IISGGVGGISLWLVVFPVDCVKSRIQVLSMTGKQAGF 250

  Fly   265 MDCVNRTLKEEGISAFFKG 283
            :....|.|:.||:.|.:.|
 Frog   251 LSTFGRILRNEGVMALYSG 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GC2NP_731657.2 Mito_carr 16..106 CDD:395101 23/83 (28%)
Mito_carr 123..203 CDD:395101 21/85 (25%)
Mito_carr 228..302 CDD:395101 18/57 (32%)
MGC108450NP_001015800.1 Mito_carr 9..90 CDD:395101 23/84 (27%)
Mito_carr 103..195 CDD:395101 25/101 (25%)
Mito_carr 206..297 CDD:395101 19/68 (28%)

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