DRSC/TRiP Functional Genomics Resources

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Protein Alignment GC2 and slc25a55b

DIOPT Version :9

Sequence 1:NP_731657.2 Gene:GC2 / 41449 FlyBaseID:FBgn0037970 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_001003448.1 Gene:slc25a55b / 445054 ZFINID:ZDB-GENE-040801-184 Length:331 Species:Danio rerio


Alignment Length:324 Identity:160/324 - (49%)
Similarity:218/324 - (67%) Gaps:32/324 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 QKFNVFPKIINGGVAGIIGVACVYPLDMVKTRLQNQTIGPNGERMYTSIADCFRKTIASEGYFGM 80
            |..::..|:|||||||::||.||:|:|:.|||||||.   ..:|:|.::.||..||:.|||||||
Zfish     4 QPISLPAKLINGGVAGLVGVTCVFPIDLAKTRLQNQR---GSQRVYKNMMDCLIKTVRSEGYFGM 65

  Fly    81 YRGSAVNIVLITPEKAIKLTANDFFRYHLASDDGVIPLSRATLAGGLAGLFQIVVTTPMELLKIQ 145
            |||:|||:.|:||||||||.||||||..|:..|..:.:.:..|||..||:.|::||||||:||||
Zfish    66 YRGAAVNLTLVTPEKAIKLAANDFFRQRLSRGDLKLSVFQEMLAGCGAGMCQVIVTTPMEMLKIQ 130

  Fly   146 MQDAGRVAAADR-----------AAG------------REVKTITALGLTKTLLRERGIFGLYKG 187
            :|||||:.|..|           ||.            ..::.::|:.:.:.|.|.:||.|||||
Zfish   131 LQDAGRLVAQQRNVPILHTVKLGAASPVLNYSYSVGPVSSIRKVSAVQIAQELFRTKGIQGLYKG 195

  Fly   188 VGATGVRDITFSMVYFPLMAWINDQGPRKSDGSGEAVFYWSLIAGLLSGMTSAFMVTPFDVVKTR 252
            :|||.:|||.||:|||||.|.||..|  |:....:..||||.|:|.::|.|:|..|:|.||||||
Zfish   196 LGATLMRDIPFSVVYFPLFAHINQLG--KTSEDSDVPFYWSFISGCVAGCTAAVAVSPCDVVKTR 258

  Fly   253 LQ----ADGEKKFKGIMDCVNRTLKEEGISAFFKGGLCRIMVLAPLFGIAQMFYFLGVGEKILG 312
            ||    :..|..:.|::||:.:.:::||.|||.||..||.:|:||||||||:.||:||||.:||
Zfish   259 LQSLNKSANEDTYNGVVDCIRKIMRKEGPSAFLKGAGCRALVIAPLFGIAQVVYFIGVGEFLLG 322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GC2NP_731657.2 PTZ00169 14..289 CDD:240302 143/299 (48%)
Mito_carr 16..106 CDD:278578 54/89 (61%)
Mito_carr 123..203 CDD:278578 44/102 (43%)
Mito_carr 228..302 CDD:278578 38/77 (49%)
slc25a55bNP_001003448.1 Mito_carr 4..96 CDD:278578 57/94 (61%)
Mito_carr 100..214 CDD:278578 47/113 (42%)
Mito_carr 227..312 CDD:278578 41/84 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 135 1.000 Domainoid score I4914
eggNOG 1 0.900 - - E1_KOG0750
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H133793
Inparanoid 1 1.050 351 1.000 Inparanoid score I2237
OMA 1 1.010 - - QHG53612
OrthoDB 1 1.010 - - D458796at33208
OrthoFinder 1 1.000 - - FOG0002230
OrthoInspector 1 1.000 - - mtm6363
orthoMCL 1 0.900 - - OOG6_104895
Panther 1 1.100 - - O PTHR45678
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X982
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1413.840

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