DRSC/TRiP Functional Genomics Resources

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Protein Alignment GC2 and aralar1

DIOPT Version :10

Sequence 1:NP_731657.2 Gene:GC2 / 41449 FlyBaseID:FBgn0037970 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_001247368.1 Gene:aralar1 / 43616 FlyBaseID:FBgn0028646 Length:707 Species:Drosophila melanogaster


Alignment Length:282 Identity:114/282 - (40%)
Similarity:157/282 - (55%) Gaps:19/282 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 GGVAGIIGVACVYPLDMVKTRLQNQTIGPN-GERMYTSIADCFRKTIASEGYFGMYRGSAVNIVL 90
            |..||.:|...|||:|:||||:|||..|.. ||..|.:..|||:|.:..||:.|:|||....::.
  Fly   361 GSFAGAVGATVVYPIDLVKTRMQNQRAGSYIGEVAYRNSWDCFKKVVRHEGFMGLYRGLLPQLMG 425

  Fly    91 ITPEKAIKLTANDFFRYHLASDDGVIPLSRATLAGGLAGLFQIVVTTPMELLKIQMQDAGRVAAA 155
            :.||||||||.||..|..|....|.||.....||||.||..|:|.|.|:|::||::|.||.:|:.
  Fly   426 VAPEKAIKLTVNDLVRDKLTDKK
GNIPTWAEVLAGGCAGASQVVFTNPLEIVKIRLQVAGEIASG 490

  Fly   156 DRAAGREVKTITALGLTKTLLRERGIFGLYKGVGATGVRDITFSMVYFPLMAWINDQGPRKSDGS 220
            .:.....|            :||.|:||||||..|..:||:.||.:|||..|........| ||.
  Fly   491 SKIRAWSV------------VRELGLFGLYKGARACLLRDVPFSAIYFPTYAHTKAMMADK-DGY 542

  Fly   221 GEAVFYWSLIAGLLSGMTSAFMVTPFDVVKTRLQA---DGEKKFKGIMDCVNRTLKEEGISAFFK 282
            ...:..  |.||.::|:.:|.:|||.||:|||||.   .|:..:.|:.|...:.:.|||..||:|
  Fly   543 NHPLTL--LAAGAIAGVPAASLVTPADVIKTRLQVVARSGQTTYTGVWDATKKIMAEEGPRAFWK 605

  Fly   283 GGLCRIMVLAPLFGIAQMFYFL 304
            |...|:...:|.||:..:.|.|
  Fly   606 GTAARVFRSSPQFGVTLVTYEL 627

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GC2NP_731657.2 Mito_carr 16..106 CDD:395101 39/79 (49%)
Mito_carr 123..203 CDD:395101 32/79 (41%)
Mito_carr 228..302 CDD:395101 29/76 (38%)
aralar1NP_001247368.1 FRQ1 32..178 CDD:444056
Mito_carr 350..448 CDD:395101 41/86 (48%)
Mito_carr 449..539 CDD:395101 39/101 (39%)
Mito_carr 544..633 CDD:395101 31/86 (36%)
Blue background indicates that the domain is not in the aligned region.

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