DRSC/TRiP Functional Genomics Resources

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Protein Alignment GC2 and CG5646

DIOPT Version :10

Sequence 1:NP_731657.2 Gene:GC2 / 41449 FlyBaseID:FBgn0037970 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_651568.1 Gene:CG5646 / 43311 FlyBaseID:FBgn0039525 Length:303 Species:Drosophila melanogaster


Alignment Length:310 Identity:91/310 - (29%)
Similarity:135/310 - (43%) Gaps:65/310 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 VAGIIGVAC----VYPLDMVKTRLQNQTIGPNGERMYTSIADCFRKTIASEGYFGMYRG------ 83
            |||..|.||    .:|||.:|...|     .:...:.|:|...:.:   :.|..|.|||      
  Fly    10 VAGCFGGACGVLVAHPLDTIKVWQQ-----ASNSSVVTAIQQIYSR---NNGVNGFYRGMFFPFI 66

  Fly    84 --SAVNIVLI-----TPEKAIKLTANDFFR----YHLASDDGVIPLSRATLAGGLAGLFQIVVTT 137
              .|:|.:|.     ...:..|:..:|:.|    ||           ...|||.:||..|..:..
  Fly    67 STGAINSLLFGIY
GNHLRQLRKVCHSDYQREQLEYH-----------NMFLAGSVAGFVQSFIAC 120

  Fly   138 PMELLKIQMQDAGRVAAADRAAGREVKTITALGLTKTLLRERGIFGLYKGVGATGVRDITFSMVY 202
            ||||:|:::|.|  ...:|...|:.   .||.|..|.:|:..||.|||:|:.....||:....:|
  Fly   121 PMELIKVRLQTA--TYYSDYLYGQR---RTAFGTFKRILKTDGISGLYRGLLPMMCRDVLPYGIY 180

  Fly   203 FPLMAWINDQG-----------PRKSDGSGEAV-FYWSLIAGLLSGMTSAFMVTPFDVVKTRLQA 255
              ::|:  .||           .|:|...|.:| ...:.:||..:|:.|...|.|||||||.:||
  Fly   181 --MLAY--RQGVDYM
DRRDFVRRRRSQSDGSSVNLLVTTLAGAWAGVISWVCVIPFDVVKTLMQA 241

  Fly   256 DGEKKFKGIMDCVNRTLKEEGISAFFKGGLCRIMVLAPLFGIAQMFYFLG 305
            |...|::||..||....:..|..:.|:|....:....| |..|.   |||
  Fly   242 DENHKYRGIFHCVRVQYRAYGWRSIFRGSWMLVARAVP-FNAAT---FLG 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GC2NP_731657.2 Mito_carr 16..106 CDD:395101 23/93 (25%)
Mito_carr 123..203 CDD:395101 28/79 (35%)
Mito_carr 228..302 CDD:395101 26/73 (36%)
CG5646NP_651568.1 Mito_carr 5..79 CDD:395101 21/76 (28%)
Mito_carr 97..191 CDD:395101 34/113 (30%)
Mito_carr 207..294 CDD:395101 30/85 (35%)

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