DRSC/TRiP Functional Genomics Resources

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Protein Alignment GC2 and CG5805

DIOPT Version :10

Sequence 1:NP_731657.2 Gene:GC2 / 41449 FlyBaseID:FBgn0037970 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_651284.1 Gene:CG5805 / 42950 FlyBaseID:FBgn0039223 Length:339 Species:Drosophila melanogaster


Alignment Length:323 Identity:78/323 - (24%)
Similarity:121/323 - (37%) Gaps:91/323 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 CVYPLDMVKTRLQNQTIGPNGERMYTSIADCFRKTIASEGYFGMYRG---SAVNIV----LITPE 94
            |::||.::||:||.|    :...:|..:.||..|...|||..|:|||   |:|.||    .|:..
  Fly    56 CLFPLTVIKTQLQVQ----HKSDVYKGMVDCAMKIYRSEGVPGLYRGFWISSVQIVSGVFYISTY 116

  Fly    95 KAIKLTANDFFRYHLASDDGVIPLSRATLAGGLAGLFQIVVTTPMELLKIQMQDAGRVAAADRAA 159
            :.::         |:.:|.|.....:|...||.|.|....:..|.:::.......|..|.|....
  Fly   117 EGVR---------HVLND
LGAGHRMKALAGGGCASLVGQTIIVPFDVISQHAMVLGMSAHAGSKG 172

  Fly   160 -----------GREVKTITALGLTKTLLRERGIFGLYKGVGATGVRDITFSMVYFP--LMAWIND 211
                       ||. :...::.:.:.::|..|..|.|:|..|:       .|.|.|  .|.|   
  Fly   173 DINPLGIKSWPGRS-RLHISMDIGREIMRRDGFRGFYRGYTAS-------LMAYVPNSAMWW--- 226

  Fly   212 QGPRKSDGSGEAVFY-------------W------SLIAGLLSGMTSAFMVTPFDVVKTRLQADG 257
                        .||             |      ..:||.|.|.|:..:..|.|:|:.|||.  
  Fly   227 ------------AFYHLYQDELFRICPVWVSHLFIQCVAGSLGGFTTTILTNPLDIVRARLQV-- 277

  Fly   258 EKKFKGIMDCVNRTLKEEGISAFFKGGLCRIMVLAPL-FGIAQMFYFLGVGEKILGIERTKSV 319
             .:...:........:||.::.||||...|::..|.. |.|            |||.|..|.:
  Fly   278 -HRLDSMSVAFRELWQEEKLNCFFKGLSARLVQSAAFSFSI------------ILGYETIKRI 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GC2NP_731657.2 Mito_carr 16..106 CDD:395101 24/75 (32%)
Mito_carr 123..203 CDD:395101 17/90 (19%)
Mito_carr 228..302 CDD:395101 21/74 (28%)
CG5805NP_651284.1 Mito_carr 46..125 CDD:395101 25/81 (31%)
Mito_carr 132..238 CDD:395101 24/128 (19%)
Mito_carr 245..327 CDD:395101 26/96 (27%)

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