DRSC/TRiP Functional Genomics Resources

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Protein Alignment GC2 and slc25a55a

DIOPT Version :10

Sequence 1:NP_731657.2 Gene:GC2 / 41449 FlyBaseID:FBgn0037970 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_998573.1 Gene:slc25a55a / 406717 ZFINID:ZDB-GENE-040426-2745 Length:329 Species:Danio rerio


Alignment Length:330 Identity:160/330 - (48%)
Similarity:218/330 - (66%) Gaps:31/330 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 QKFNVFPKIINGGVAGIIGVACVYPLDMVKTRLQNQTIGPNGERMYTSIADCFRKTIASEGYFGM 80
            |:.::..|:||||:|||:||.||:|:|:.|||||||.   .|:::|.|:.||..||:.:||||||
Zfish     3 QQISLPAKLINGGIAGIVGVTCVFPIDLAKTRLQNQR---QGQQVYKSMIDCLIKTVRTEGYFGM 64

  Fly    81 YRGSAVNIVLITPEKAIKLTANDFFRYHLASDDGVIPLSRATLAGGLAGLFQIVVTTPMELLKIQ 145
            |||:|||:.|:||||||||.||||||.||:.:...:.:.:..|||..||:.|::||||||:||||
Zfish    65 YRGAAVNLTLVTPEKAIKLAANDFFRCHLSRNGRGLNVFKEMLAGCAAGMCQVIVTTPMEMLKIQ 129

  Fly   146 MQDAGRVAAADRAAG----------------------REVKTITALGLTKTLLRERGIFGLYKGV 188
            :|||||:||..|..|                      ...:.::|..:.:.||..:||.|||||:
Zfish   130 LQDAGRLAAQQRKPGLIPPTRLAANTVLCRSYNVVPNSSARAVSATQIARELLHTQGIQGLYKGL 194

  Fly   189 GATGVRDITFSMVYFPLMAWINDQGPRKSDGSGEAVFYWSLIAGLLSGMTSAFMVTPFDVVKTRL 253
            |||.:||:.||:|||||.|.:|..|....|.:  |.||||.|:|.::|.|:|..|.|.|||||||
Zfish   195 GATLLRDVPFSIVYFPLFANLNKLGKPSPDEA--APFYWSFISGCVAGSTAAVAVNPCDVVKTRL 257

  Fly   254 QA----DGEKKFKGIMDCVNRTLKEEGISAFFKGGLCRIMVLAPLFGIAQMFYFLGVGEKILGIE 314
            |:    ..|..:.||:||.::.::.||.|||.||..||.:|:||||||.|:.|||||||.|:...
Zfish   258 QSLSKGANEDTYSGIVDCFSKIMRREGPSAFLKGAGCRALVIAPLFGIVQVMYFLGVGEFIVSQT 322

  Fly   315 RTKSV 319
            :.|.:
Zfish   323 QLKLI 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GC2NP_731657.2 Mito_carr 16..106 CDD:395101 54/89 (61%)
Mito_carr 123..203 CDD:395101 43/101 (43%)
Mito_carr 228..302 CDD:395101 38/77 (49%)
slc25a55aNP_998573.1 PTZ00169 1..292 CDD:240302 140/293 (48%)
Mito_carr 3..97 CDD:395101 58/96 (60%)

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