DRSC/TRiP Functional Genomics Resources

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Protein Alignment GC2 and slc25a40

DIOPT Version :10

Sequence 1:NP_731657.2 Gene:GC2 / 41449 FlyBaseID:FBgn0037970 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_989316.1 Gene:slc25a40 / 394941 XenbaseID:XB-GENE-1003942 Length:341 Species:Xenopus tropicalis


Alignment Length:346 Identity:88/346 - (25%)
Similarity:141/346 - (40%) Gaps:69/346 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 QKNQEQKKPQKFNVFP--KIINGGVAGIIGVACVYPLDMVKTRLQNQT----------------- 52
            |||.|..: :..|:.|  ::|...:..::....|.|||:||.|||.|:                 
 Frog     2 QKNTEPVQ-EAINITPSQQMIASSMGALLTSFFVTPLDVVKIRLQAQSKPFIKGKCFVYCNGLMD 65

  Fly    53 -----IGPNGERMYTS------IADCFRKTIASEGYFGMYRGSAVNIVLITPEKAIKLTANDFFR 106
                 ...||:..|.:      ..|.|.:.|.:||...::.|....:|:..|...|..|..|..|
 Frog    66 HLCLCTNGNGKAWYRAPGHFRGTTDAFVQIIRNEGIKSLWSGLPPTLVMAVPATVIYFTCYDQLR 130

  Fly   107 YHLASDDGVIPLSRATL----AGGLAGLFQIVVTTPMELLKIQMQDAGRVAAADRAAGREVKTIT 167
            ..|...   :| .||.:    ||..|.|:...:.:|:||::.:||       ....:.:|::...
 Frog   131 DILIRS---MP-ERAEIASLVAGATARLWSATLISPLELIRTKMQ-------YRPLSYKELRQCI 184

  Fly   168 ALGLTKTLLRERGIFGLYKGVGATGVRDITFSMVYFPLMAWINDQGPRKS----DGSGEAVFYWS 228
            ...:.|.     |...|:||.|.|.:||:.||.:|     |.|.:..::|    ..:.:..|..|
 Frog   185 QSSVAKD-----GWLALWKGWGPTVLRDVPFSALY-----WHNYELVKQSLCQRYNTLQPTFAIS 239

  Fly   229 LIAGLLSGMTSAFMVTPFDVVKTRLQAD---------GEKKFKGIMDCVNRTLKEEGISAFFKGG 284
            ..||.:||..:|.:..||||||||.|.:         .:|:.......:...:.|.|....|.|.
 Frog   240 FTAGAVSGSIAAIVTLPFDVVKTRRQVEVGELEMFTYSQKRSSSTWKLMRAIVIENGFGGLFAGL 304

  Fly   285 LCRIMVLAPLFGIAQMFYFLG 305
            :.|::.:||...|....|..|
 Frog   305 IPRLIKVAPACAIMISTYEFG 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GC2NP_731657.2 Mito_carr 16..106 CDD:395101 27/119 (23%)
Mito_carr 123..203 CDD:395101 21/83 (25%)
Mito_carr 228..302 CDD:395101 24/82 (29%)
slc25a40NP_989316.1 Mito_carr 14..136 CDD:395101 28/121 (23%)
Solcar 1 14..132 27/117 (23%)
Solcar 2 140..224 26/100 (26%)
Mito_carr 143..225 CDD:395101 24/98 (24%)
Mito_carr 233..331 CDD:395101 27/93 (29%)
Solcar 3 234..328 27/92 (29%)

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