DRSC/TRiP Functional Genomics Resources

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Protein Alignment GC2 and slc25a30

DIOPT Version :10

Sequence 1:NP_731657.2 Gene:GC2 / 41449 FlyBaseID:FBgn0037970 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_001165746.1 Gene:slc25a30 / 394840 XenbaseID:XB-GENE-995074 Length:291 Species:Xenopus tropicalis


Alignment Length:296 Identity:75/296 - (25%)
Similarity:109/296 - (36%) Gaps:78/296 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 INGGVAGIIGVACVYPLDMVKTRLQNQTIGPNGERMYTSIADCFRKTIASEGYFGMYRGSAVNIV 89
            |.||:|.|......:|:|:.|||||.|  |...:..|..|               .|||....||
 Frog    10 IYGGLASITAECGTFPIDLTKTRLQVQ--GQANDAKYKEI---------------RYRGMLHAIV 57

  Fly    90 LITPEKAIKLTANDFFRYHLASDDGVIP--LSRAT-----------------------------L 123
            .|..|:.:|           |...|:.|  |.:|:                             .
 Frog    58 RIWKEEGVK-----------ALYSGIAPAMLRQASYGTIKIGTYQSLKRLFVDCPEDETLVINVF 111

  Fly   124 AGGLAGLFQIVVTTPMELLKIQMQDAGRVAAADRAAGREVKTITALGLTKTLLRERGIFGLYKGV 188
            .|.|:|:....:..|.::|||:||..|.:....           .:|....:.::.|..||:|||
 Frog   112 CGVLSGVVSSCIANPTDVLKIRMQAQGSLIQGG-----------MIGNFINIYQQEGTRGLWKGV 165

  Fly   189 GATGVRDITFSMVYFPLMAWINDQGPRKSDGSGEAVFYWSLIAGLLSGMTSAFMVTPFDVVKTRL 253
            ..|..|......|..|:.. |..:....|...|:.| |...:|....|:..|....|.|||:||:
 Frog   166 SLTAQRAAIVVGVELPVYD-ITKKHLILSGLMGDTV-YTHFLASFTCGLAGALASNPVDVVRTRM 228

  Fly   254 QAD------GEKKFKGIMDCVNRTLKEEGISAFFKG 283
            ...      ....:||.:||:.:|.|.||..|.:||
 Frog   229 MNQRSIRNVSNSSYKGTLDCLLQTWKNEGFFALYKG 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GC2NP_731657.2 Mito_carr 16..106 CDD:395101 24/80 (30%)
Mito_carr 123..203 CDD:395101 20/79 (25%)
Mito_carr 228..302 CDD:395101 20/62 (32%)
slc25a30NP_001165746.1 Solcar 1 7..96 29/113 (26%)
PTZ00169 9..289 CDD:240302 75/296 (25%)
Solcar 2 104..189 22/96 (23%)
Solcar 3 198..289 22/68 (32%)

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