DRSC/TRiP Functional Genomics Resources

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Protein Alignment GC2 and slc25a20

DIOPT Version :10

Sequence 1:NP_731657.2 Gene:GC2 / 41449 FlyBaseID:FBgn0037970 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_989099.1 Gene:slc25a20 / 394703 XenbaseID:XB-GENE-971451 Length:301 Species:Xenopus tropicalis


Alignment Length:317 Identity:97/317 - (30%)
Similarity:148/317 - (46%) Gaps:43/317 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 KKPQKFNVFPKIINGGVAGIIGVACVYPLDMVKTRLQNQT-----IGPNGERMYTSIADCFRKTI 72
            |:||..:.......||..||..|...:|||.:|.|:|.|.     |.|    :|:...|||:||:
 Frog     3 KQPQPISPMKNFFAGGFGGICLVFAGHPLDTIKVRIQTQPKPVPGIPP----LYSGTFDCFKKTL 63

  Fly    73 ASEGYFGMYRGSAVNIVLITPEKAIKLTANDFFRYHLAS------DDGVIPLSRATLAGGLAGLF 131
            .:||..|:|:|.|..|:.:||..|:     .||.:.|..      .:.::...:...||.|:|:|
 Frog    64 VNEGLRGLYKGMAAPIIGVTPMFAV-----CFFGFGLGKKLQQKHPEDILTYPQLFAAGMLSGVF 123

  Fly   132 QIVVTTPMELLKIQMQDAGRVAAADRAAGREVKTITALGLTKTLLRERGIFGLYKGVGATGVRDI 196
            ...:..|.|.:|..:|        .:||..|||....:...|.|.||.||.|:|||...|.:||:
 Frog   124 TTAIMAPGERIKCLLQ--------IQAASGEVKYAGPMDCAKQLYREAGIRGIYKGTVLTLMRDV 180

  Fly   197 TFSMVYFPLMAWIND----QGPRKSDGSGEAVFYWSLIAGLLSGMTSAFMVTPFDVVKTRLQADG 257
            ..|.:||....|:.:    :|...|:.|...:    |.||.::|:.:..:..|.||:|:|.|...
 Frog   181 PASGMYFMTYEWLKNILTPEGHSVSELSVPKI----LFAGGMAGIFNWAVAIPPDVLKSRFQTAP 241

  Fly   258 EKKF-KGIMDCVNRTLKEEGISAFFKGGLCRIMVLAPLFGIAQMFYFLG--VGEKIL 311
            ..|: .|..|.:...::||||.:.:||....::...|    |....|||  |..|.|
 Frog   242 AGKYPNGFRDVLRELIREEGIGSLYKGFTAVMLRAFP----ANAACFLGFEVAMKFL 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GC2NP_731657.2 Mito_carr 16..106 CDD:395101 32/94 (34%)
Mito_carr 123..203 CDD:395101 28/79 (35%)
Mito_carr 228..302 CDD:395101 21/74 (28%)
slc25a20NP_989099.1 Mito_carr 6..103 CDD:395101 34/105 (32%)
Mito_carr 108..198 CDD:395101 31/97 (32%)
Mito_carr 205..294 CDD:395101 28/96 (29%)

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