DRSC/TRiP Functional Genomics Resources

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Protein Alignment GC2 and Bmcp

DIOPT Version :9

Sequence 1:NP_731657.2 Gene:GC2 / 41449 FlyBaseID:FBgn0037970 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_648501.1 Gene:Bmcp / 39322 FlyBaseID:FBgn0036199 Length:303 Species:Drosophila melanogaster


Alignment Length:293 Identity:78/293 - (26%)
Similarity:122/293 - (41%) Gaps:59/293 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 INGGVAGIIGVACVYPLDMVKTRLQNQTIGPNGERM--------YTSIADCFRKTIASEGYFGMY 81
            :.||||.|......:|:|..|||||.|     |:::        |..:.|.|.|....||...:|
  Fly    11 VYGGVASITAEFGTFPIDTTKTRLQIQ-----GQKIDQSFSQLRYRGMTDAFVKISREEGLRALY 70

  Fly    82 RG--------SAVNIVLITPEKAIKLTANDFFRYHLASDDGVIPLSRATLAGGLAGLFQIVVTTP 138
            .|        :....:.......:|..||:  |..|.::||...:....|....||.....:..|
  Fly    71 SGIWPAVLRQATYGTIKFGTYYTLKKLANE--RGLLINEDGSERVWSNILCAAAAGAISSAIANP 133

  Fly   139 MELLKIQMQDAGRVAAADRAAGREVKTITALGLTKTLLRERGIFGLYKGVGATGVRDITFSMVYF 203
            .::||::||..|:        |:....:...|   .:.:..|:.||::|||.|..|.:..:.|..
  Fly   134 TDVLKVRMQVHGK--------GQHKGLLGCFG---EIYKYEGVRGLWRGVGPTAQRAVVIASVEL 187

  Fly   204 PLMAWINDQGPRKSDGSGEAV---FYWSLIAGLLSGMTSAFMVTPFDVVKTRLQ----------- 254
            |:..:...|   ..:..|:.|   |..|.||.|.|.:.|    ||.||::|||.           
  Fly   188 PVYDFCKLQ---LMNAFGDHVGNHFISSFIASLGSAIAS----TPIDVIRTRLMNQRPVSITMNG 245

  Fly   255 ----ADGEKKFKGIMDCVNRTLKEEGISAFFKG 283
                |...|.:.|.:||..:|::.||:.|.:||
  Fly   246 VVTAAATPKLYSGSLDCAVQTIRNEGLPALYKG 278

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GC2NP_731657.2 PTZ00169 14..289 CDD:240302 78/293 (27%)
Mito_carr 16..106 CDD:278578 25/96 (26%)
Mito_carr 123..203 CDD:278578 20/79 (25%)
Mito_carr 228..302 CDD:278578 24/71 (34%)
BmcpNP_648501.1 Mito_carr 7..97 CDD:278578 23/90 (26%)
Mito_carr <132..199 CDD:278578 19/80 (24%)
Mito_carr 204..303 CDD:278578 26/79 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45442095
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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