DRSC/TRiP Functional Genomics Resources

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Protein Alignment GC2 and Tpc2

DIOPT Version :10

Sequence 1:NP_731657.2 Gene:GC2 / 41449 FlyBaseID:FBgn0037970 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_001246511.1 Gene:Tpc2 / 37983 FlyBaseID:FBgn0035078 Length:323 Species:Drosophila melanogaster


Alignment Length:321 Identity:90/321 - (28%)
Similarity:137/321 - (42%) Gaps:76/321 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 INGGVAGIIGVACVYPLDMVKTRLQNQTIGP----NGERMYTSIADCFRKTIASEGYFGMYRGSA 85
            :.||:||........|||::|.|.|.| :.|    .|.: |..:...|:...|.||..||:||..
  Fly    14 VGGGIAGAATRTITQPLDVLKIRFQMQ-VEPVTNHKGSK-YRGVIHAFKSVYAEEGMRGMFRGHN 76

  Fly    86 VNIVLITPEKAIKLTANDFFRY-------HLASDDGVIPLSRATLAGGLAGLFQIVVTTPMELLK 143
            ...||     :|......|:.|       |........|.....:.||:||....|...|.::::
  Fly    77 SGQVL-----SISYALVQFWSYEQLRSMAHQFDYWRERPFLMFFICGGIAGCLGAVAAQPFDVVR 136

  Fly   144 IQMQDAGRVAAADRAAGR-EVKTITALGLTKTLLRERGIFGLYKGVGATGV-RDITFSMV-YFPL 205
            .||      .|||.::.| ::.|.|  ||.|          :||..|..|: |.:.|::| .|||
  Fly   137 TQM------VAADPSSRRSQMNTFT--GLRK----------VYKMEGWMGLSRGLPFTLVQVFPL 183

  Fly   206 MA-------WIN---------DQGPRKSDGSGEAVFYWSLIAGLLSGMTSAFMVTPFDVVKTRLQ 254
            :.       ::|         ||   :.:..|..:|    :.|.|||:.:..:|.|.|::|.|:|
  Fly   184 VGANFLFYKYLNAAVLMAKPPDQ---RQEIHGAFLF----LNGALSGVLAKMIVYPADLLKKRIQ 241

  Fly   255 A---DGEKKFKG-------IMDCVNRTLKEEGISAFFKGGLCRI----MVLAPLFGIAQMF 301
            .   ..|:|..|       |:.|:..|.:||||..|:||.|..:    ::.|..|.|..||
  Fly   242 LMAFKQERKTFGRNPECPTILGCITTTFREEGIGGFYKGMLPTLLKAGLMSAVYFSIYDMF 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GC2NP_731657.2 Mito_carr 16..106 CDD:395101 26/84 (31%)
Mito_carr 123..203 CDD:395101 24/82 (29%)
Mito_carr 228..302 CDD:395101 29/88 (33%)
Tpc2NP_001246511.1 Mito_carr 23..99 CDD:395101 23/82 (28%)
Mito_carr 108..194 CDD:395101 28/103 (27%)
Mito_carr 216..307 CDD:395101 30/91 (33%)

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