Protein Alignment GC2 and sea

DIOPT Version :10

• Sequence 1: NP_731657.2
• Gene: GC2 / 41449
• FlyBaseID: FBgn0037970
• Length: 319
• Species: Drosophila melanogaster
• Sequence 2: NP_001027175.1
• Gene: sea / 3772221
• FlyBaseID: FBgn0037912
• Length: 317
• Species: Drosophila melanogaster
• Alignment Length: 293
• Identity: 89/293 - (30%)
• Similarity: 144/293 - (49%)
• Gaps: 20/293 - (6%)

  Fly    24 IINGGVAGIIGVACVYPLDMVKTRLQNQTIGPNGERMYTSIADCFRKTIASEGYFGMYRGSAVNI 88
            |:.||:.|.|.:...||.:.|||:||....|  ..:.|..|.||.:||:...|:.|:|||.:|.:
  Fly    37 IVAGGITGGIEICITYPTEYVKTQLQLDEKG--AAKKYNGIFDCVKKTVGERGFLGLYRGLSVLV 99

  Fly    89 VLITPEKAIKLTANDFFRYHLASDDGVIPLSRATLAGGLAGLFQ-IVVTTPMELLKIQMQDAGRV 152
            ....|:.|.:..|.:|.:.:.....|.:..|...|.|..||:.: ||..||||.:|::..:
  Fly   100 YGSIPKSAARFGAFEFLKSNAVDSRGQLSNSGKLLCGLGAGVCEAIVAVTPMETIKVKFIN---- 160

  Fly   153 AAADRAAGREVKTITALGLTKTLLRERGIFGLYKGVGATGVRDITFSMVYFPLMAWINDQGPRKS 217
               |:.:|.......|.|:.: :::..||.|:|||:..|.::..:...:.|.::..:.|.  .|.
  Fly   161 ---DQRSGNPKFRGFAHGVGQ-IIKSEGISGIYKGLTPTILKQGSNQAIRFFVLESLKDL--YKG 219

  Fly   218 DGSGEAVFYWSLIAGL---LSGMTSAFMVTPFDVVKTRLQADGEKKFKGIMDCVNRTLKEEGISA 279
            |...:.|  ..|:.|:   ::|..|.|..||.||||||:|.....|:|....|....||.||.:|
  Fly   220 DDHTKPV--PKLVVGVFGAIAGAASVFGNTPLDVVKTRMQGLEASKYKNTAHCAVEILKNEGPAA 282

  Fly   280 FFKGGLCRIMVLAPLFGIAQMFY--FLGVGEKI 310
            |:||.:.|:..:.....|..|.|  |:.:..|:
  Fly   283 FYKGTVPRLGRVCLDVAITFMIYDSFMDLFNKV 315

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
GC2	NP_731657.2	Mito_carr	16..106	CDD:395101	29/81 (36%)
		Mito_carr	123..203	CDD:395101	22/80 (28%)
		Mito_carr	228..302	CDD:395101	28/76 (37%)
sea	NP_001027175.1	Mito_carr	34..117	CDD:395101	29/81 (36%)
		Mito_carr	125..220	CDD:395101	27/104 (26%)
		Mito_carr	235..314	CDD:395101	28/78 (36%)