DRSC/TRiP Functional Genomics Resources

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Protein Alignment GC2 and Slc25a13

DIOPT Version :10

Sequence 1:NP_731657.2 Gene:GC2 / 41449 FlyBaseID:FBgn0037970 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_001406553.1 Gene:Slc25a13 / 362322 RGDID:1565889 Length:676 Species:Rattus norvegicus


Alignment Length:288 Identity:119/288 - (41%)
Similarity:169/288 - (58%) Gaps:30/288 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 GGVAGIIGVACVYPLDMVKTRLQNQ--TIGPNGERMYTSIADCFRKTIASEGYFGMYRGSAVNIV 89
            |.:||.:|...|||:|:||||:|||  |....||.||.:..|||:|.:..||:||:|||....::
  Rat   336 GSIAGAVGATAVYPIDLVKTRMQNQRSTGSFVGELMYKNSFDCFKKVLRYEGFFGLYRGLLPQLL 400

  Fly    90 LITPEKAIKLTANDFFRYHLASDDGVIPLSRATLAGGLAGLFQIVVTTPMELLKIQMQDAGRVAA 154
            .:.||||||||.|||.|......||.:||.....|||.||..|::.|.|:|::||::|.||.:..
  Rat   401 GVAPEKAIKLTVNDFVRDKFMHKDGSVPLLAEIFAGGCAGGSQVIFTNPLEIVKIRLQVAGEITT 465

  Fly   155 ADRAAGREVKTITALGLTKTLLRERGIFGLYKGVGATGVRDITFSMVYFPLMAWI-----NDQGP 214
            ..|        ::||    :::|:.|.||:|||..|..:|||.||.:|||..|.:     |:.| 
  Rat   466 GPR--------VSAL----SVVRDLGFFGIYKGAKACFLRDIPFSAIYFPCYAHVKASFANEDG- 517

  Fly   215 RKSDGSGEAVFYWSLIAGLLSGMTSAFMVTPFDVVKTRLQA---DGEKKFKGIMDCVNRTLKEEG 276
            :.|.||       .|:||.::||.:|.:|||.||:|||||.   .|:..:.|:.||..:.|:|||
  Rat   518 QVSPGS-------LLLAGAIAGMPAASLVTPADVIKTRLQVAARAGQTTYSGVTDCFRKILREEG 575

  Fly   277 ISAFFKGGLCRIMVLAPLFGIAQMFYFL 304
            ..|.:||...|:...:|.||:..:.|.|
  Rat   576 PKALWKGAGARVFRSSPQFGVTLLTYEL 603

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GC2NP_731657.2 Mito_carr 16..106 CDD:395101 42/80 (53%)
Mito_carr 123..203 CDD:395101 30/79 (38%)
Mito_carr 228..302 CDD:395101 31/76 (41%)
Slc25a13NP_001406553.1 Regulatory N-terminal domain. /evidence=ECO:0000250|UniProtKB:Q9UJS0 2..295
EF-hand_7 18..81 CDD:463900
EFh_PEF <56..183 CDD:355382
EF-hand motif 57..83 CDD:320060
EF-hand motif 84..126 CDD:320060
EF-hand motif 133..159 CDD:320060
Linker loop domain. /evidence=ECO:0000250|UniProtKB:O75746 296..312
Carrier domain. /evidence=ECO:0000250|UniProtKB:Q9UJS0 322..613 119/288 (41%)
Mito_carr 330..423 CDD:395101 43/86 (50%)
Mito_carr 425..512 CDD:395101 37/98 (38%)
Mito_carr 517..609 CDD:395101 37/95 (39%)
C-terminal domain. /evidence=ECO:0000250|UniProtKB:Q9UJS0 614..676
Blue background indicates that the domain is not in the aligned region.

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