DRSC/TRiP Functional Genomics Resources

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Protein Alignment GC2 and Slc25a30

DIOPT Version :10

Sequence 1:NP_731657.2 Gene:GC2 / 41449 FlyBaseID:FBgn0037970 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_001013205.1 Gene:Slc25a30 / 361074 RGDID:1359702 Length:291 Species:Rattus norvegicus


Alignment Length:276 Identity:75/276 - (27%)
Similarity:116/276 - (42%) Gaps:38/276 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 INGGVAGIIGVACVYPLDMVKTRLQNQTIGPNG-----ERMYTSIADCFRKTIASEGYFGMYRGS 84
            :.||:|.|......:|:|:.|||||.|  |...     |..|..:.....:....||...:|.|.
  Rat    10 VYGGLASITAECGTFPIDLTKTRLQIQ--GQTNDAKFREIRYRGMLHALMRIGREEGLRALYSGI 72

  Fly    85 AVNIVLITPEKAIKLTANDFFRYHLA---SDDGVIPLSRATLAGGLAGLFQIVVTTPMELLKIQM 146
            |..::.......||:......: .||   .:|..:.::  .:.|.|:|:....:..|.::|||:|
  Rat    73 APAMLRQASYGTIKIGTYQSLK-RLAVERPEDETLLIN--VVCGILSGVISSAIANPTDVLKIRM 134

  Fly   147 QDAGRVAAADRAAGREVKTITALGLTKTLLRERGIFGLYKGVGATGVRDITFSMVYFPLMAWIND 211
            | |...|......|..:          ::.::.|..||:|||..|..|......|..|:.. |..
  Rat   135 Q-AQNSAVQGGMIGNFI----------SIYQQEGTRGLWKGVSLTAQRAAIVVGVELPVYD-ITK 187

  Fly   212 QGPRKSDGSGEAV---FYWSLIAGLLSGMTSAFMVTPFDVVKTRLQ-----ADGE-KKFKGIMDC 267
            :....|...|:.|   |..|...||:..:.|    .|.|||:||:.     .||. ..:||.:||
  Rat   188 KHLILSGLMGDTVSTHFLSSFTCGLVGALAS----NPVDVVRTRMMNQRDLRDGRCSGYKGTLDC 248

  Fly   268 VNRTLKEEGISAFFKG 283
            :.:|.|.||..|.:||
  Rat   249 LLQTWKNEGFFALYKG 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GC2NP_731657.2 Mito_carr 16..106 CDD:395101 22/85 (26%)
Mito_carr 123..203 CDD:395101 21/79 (27%)
Mito_carr 228..302 CDD:395101 23/62 (37%)
Slc25a30NP_001013205.1 Solcar 1 7..96 22/88 (25%)
PTZ00169 9..289 CDD:240302 75/276 (27%)
Solcar 2 104..189 23/98 (23%)
Solcar 3 198..289 25/71 (35%)
Mito_carr 199..289 CDD:395101 25/70 (36%)

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