DRSC/TRiP Functional Genomics Resources

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Protein Alignment GC2 and MME1

DIOPT Version :10

Sequence 1:NP_731657.2 Gene:GC2 / 41449 FlyBaseID:FBgn0037970 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_609093.1 Gene:MME1 / 33987 FlyBaseID:FBgn0031881 Length:299 Species:Drosophila melanogaster


Alignment Length:334 Identity:93/334 - (27%)
Similarity:148/334 - (44%) Gaps:54/334 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LEQVEQKNQEQKKPQKFNVFPKIINGGVAGIIGVACVYPLDMVKTRLQNQTIGPNGE-RMYTSIA 65
            :|:||...:::..|.|     ..|.|||.|:..|...:|||.:|.|||.....|.|: ..|..:.
  Fly     1 MEEVEISTEKKSNPVK-----SFIAGGVGGMCNVLVGHPLDTIKVRLQTMPTPPPGQPPRYKGVI 60

  Fly    66 DCFRKTIASEGYFGMYRGSAVNIVLITPEKAIKLTANDFFRY----HLASDDGVIPLSRATL--A 124
            ||..:|...||:.|.|||.:..:|.:||..|:     ||..|    .|...|..|.|:...:  |
  Fly    61 DCAARTFRYEGFRGFYRGISAPLVGVTPIYAV-----DFAVYAAGKRLFQTDDHIRLTYPQIFAA 120

  Fly   125 GGLAGLFQIVVTTPMELLKIQMQDAGRVAAADRAAGREVKTIT--------ALGLTKTLLRERGI 181
            |.|||:...:||.|.:.:|:.:|               .:|::        .:.....|.|:.||
  Fly   121 GALAGVCSALVTVPTDRIKVLLQ---------------TQTVSNGPLLYNGTIDTAAKLYRQGGI 170

  Fly   182 FGLYKGVGATGVRDITFSMVYFPLMAWINDQGPRKSDGSGEAVFYWSLIAGLLSGMTSAFMVTPF 246
            ..|:||..|..:||..... ||....::.:.. ||...:|:.....::::|..:|:....:..||
  Fly   171 RSLFKGTCACILRDSPTGF-YFVTYEFLQELA-RKKSANGKISTTSTILSGGTAGIVFWTLAVPF 233

  Fly   247 DVVKTRLQADGEKKFK-GIMDCVNRTLKEEGISAFFKGGLCRIMVLAPLFGIAQMFYFLGVGEKI 310
            ||:|:|||:..|..:| ||.......:..||..|.|:|.|..::...|  ..|.:|:        
  Fly   234 DVLKSRLQSAPEGTYKHGIRSVFRNLMATEGPKALFRGILPILLRAFP--STAAVFF-------- 288

  Fly   311 LGIERTKSV 319
             |:|.|..:
  Fly   289 -GVELTNDL 296

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GC2NP_731657.2 Mito_carr 16..106 CDD:395101 32/90 (36%)
Mito_carr 123..203 CDD:395101 21/89 (24%)
Mito_carr 228..302 CDD:395101 22/74 (30%)
MME1NP_609093.1 Mito_carr 10..107 CDD:395101 35/106 (33%)
Mito_carr 111..205 CDD:395101 26/110 (24%)
Mito_carr 208..297 CDD:395101 27/100 (27%)

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