DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GC2 and Ucp4B

DIOPT Version :10

Sequence 1:NP_731657.2 Gene:GC2 / 41449 FlyBaseID:FBgn0037970 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_608977.1 Gene:Ucp4B / 33833 FlyBaseID:FBgn0031758 Length:337 Species:Drosophila melanogaster


Alignment Length:330 Identity:87/330 - (26%)
Similarity:137/330 - (41%) Gaps:68/330 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 EQKNQEQKKPQKFNVF------PKI-------INGGVAGIIGVACVYPLDMVKTRLQNQ-----T 52
            |..|.|:|:..|....      |.:       .:...|.|:|    ||.||.|||:|.|     .
  Fly    13 EWDNSEEKERPKLEYLVTNKKTPPVELYLTAFASACSAEIVG----YPFDMCKTRMQIQGEIASR 73

  Fly    53 IGPNGERMYTSIADCFRKTIASEGYFGMYRGSAVNIVLITPEKAIKLTANDFFRYHL--ASDDGV 115
            :|...:  |..:.......:..||...:|.|.:..:...:....||:...|:.|..:  ..:||.
  Fly    74 VGQKAK--YRGLLATAMGIVREEGLLKLYGGISAMLFRHSLFSGIKMLTYDYMREKMIVPDEDGR 136

  Fly   116 IPLS--RATLAGGLAGLFQIVVTTPMELLKIQMQDAGRVAAADRAAGREVKTITALGLTKTLLRE 178
            ..||  .:.::|.|||....|:|.|.||:|||||..|:    .|..|...:....|....::.|.
  Fly   137 PQLSFLGSCISGVLAGATASVLTNPTELIKIQMQMEGQ----RRLRGEPPRIHNVLQALTSIYRT 197

  Fly   179 RGIFGLYKG------------VGATGVRDI--TFSMVYFPLMAWINDQGPRKSDGSGEAVFYWSL 229
            .|:.||:||            :|.....|.  .|.:..|.|:            .:.|..|    
  Fly   198 GGVVGLWKGTVPNTWRSALVTIGDVSCYDFCKRFLIAEFDLV------------DNREVQF---- 246

  Fly   230 IAGLLSGMTSAFMVTPFDVVKTRL--QADGEK----KFKGIMDCVNRTLKEEGISAFFKGGLCRI 288
            :|.:.:|:..|.:..|.||||:|:  |...|:    .:||.:||::|.::|||..|.:||.:...
  Fly   247 VAAMTAGVADAILSLPADVVKSRIMNQPTDEQGRGIHYKGSLDCLSRLVREEGFLAMYKGFIPYW 311

  Fly   289 MVLAP 293
            |.:.|
  Fly   312 MRVGP 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GC2NP_731657.2 Mito_carr 16..106 CDD:395101 23/107 (21%)
Mito_carr 123..203 CDD:395101 27/93 (29%)
Mito_carr 228..302 CDD:395101 24/72 (33%)
Ucp4BNP_608977.1 Mito_carr 32..129 CDD:395101 23/102 (23%)
Mito_carr 138..233 CDD:395101 29/98 (30%)
Mito_carr 246..331 CDD:395101 25/75 (33%)

Return to query results.
Submit another query.