DRSC/TRiP Functional Genomics Resources

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Protein Alignment GC2 and slc25a4

DIOPT Version :10

Sequence 1:NP_731657.2 Gene:GC2 / 41449 FlyBaseID:FBgn0037970 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_999867.1 Gene:slc25a4 / 327067 ZFINID:ZDB-GENE-030131-5275 Length:298 Species:Danio rerio


Alignment Length:297 Identity:76/297 - (25%)
Similarity:118/297 - (39%) Gaps:66/297 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 GGVAGIIGVACVYPLDMVKTRLQNQTIGP--NGERMYTSIADCFRKTIASEGYFGMYRGSAVNIV 89
            ||||..|....|.|::.||..||.|....  ..:..|..|.||..:....:|:...:||:..|::
Zfish    15 GGVAAAISKTAVAPIERVKLLLQVQHASKQITADMQYKGIIDCVVRIPKEQGFLSFWRGNLANVI 79

  Fly    90 LITPEKAIKLTAND---------------FFRY---HLASDDGVIPLSRATLAGGLAGLFQIVVT 136
            ...|.:|:.....|               |:||   :|||             ||.||...:...
Zfish    80 RYFPTQALNFAFKDKYKKIFLGGVDKNTQFWRYFAGNLAS-------------GGAAGATSLCFV 131

  Fly   137 TPMELLKIQMQDAGRVAAADRAAGREVKTITALG-LTKTLLRERGIFGLYKG--VGATGVRDITF 198
            .|::..:.::       |||...|...:..|.|| ....:.:..|:.|||.|  |...|:  |.:
Zfish   132 YPLDFARTRL-------AADIGKGAAEREFTGLGNCVAKIFKSDGLRGLYLGFNVSVQGI--IIY 187

  Fly   199 SMVYFPLMAWINDQGPRKSDGSGEAVFYWSL------IAGLLSGMTSAFMVTPFDVVKTRLQADG 257
            ...||.:  :...:|..........|..|.:      :||::|        .|||.|:.|:....
Zfish   188 RAAYFGI--YDTAKGMLPDPKHTHIVVSWMIAQTVTAVAGIIS--------YPFDTVRRRMMMQS 242

  Fly   258 EKK-----FKGIMDCVNRTLKEEGISAFFKGGLCRIM 289
            .:|     :||.:||..:..|:||..|||||.|..::
Zfish   243 GRKGADIMYKGTIDCWKKIAKDEGGKAFFKGALSNVI 279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GC2NP_731657.2 Mito_carr 16..106 CDD:395101 24/95 (25%)
Mito_carr 123..203 CDD:395101 20/82 (24%)
Mito_carr 228..302 CDD:395101 22/73 (30%)
slc25a4NP_999867.1 PTZ00169 7..296 CDD:240302 76/297 (26%)

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