DRSC/TRiP Functional Genomics Resources

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Protein Alignment GC2 and CG1628

DIOPT Version :10

Sequence 1:NP_731657.2 Gene:GC2 / 41449 FlyBaseID:FBgn0037970 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_572639.2 Gene:CG1628 / 31990 FlyBaseID:FBgn0030218 Length:459 Species:Drosophila melanogaster


Alignment Length:314 Identity:84/314 - (26%)
Similarity:130/314 - (41%) Gaps:74/314 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 INGG--------VAGII--------GVACVY---PLDMVKTRLQNQTIGPNGERMYTSIADCFRK 70
            ::||        |.|:|        |.|.||   |||.||.:||      .....|..:.|||..
  Fly   155 MHGGGTGNNINFVEGLIDFLAGSLGGAAQVYVSQPLDTVKVKLQ------TFPEAYRGMLDCFLS 213

  Fly    71 TIASEGYF-GMYRGSAVNIVLITPEKAIKLTA----NDFFRYHLASDD-GVIPLSRATLAGGLAG 129
            |...:|.. |:|.||...:.....|.::...|    ..|..:.:..:. |.:...:...||.||.
  Fly   214 TYRKDGVLRGLYAGSVPAVFANVAENSVLFAAYGGCQKFVAFCVGKETAGDLTTVQNACAGSLAA 278

  Fly   130 LFQIVVTTPMELLKIQMQDAGRVAAADRAAGREVKTI----------TALGLTKTLLRERGIFGL 184
            .|..:...|.||:|.::|           |.||:|..          |...||:.:.|..||.|.
  Fly   279 CFSTLTLCPTELIKCKLQ-----------ALREMKNFVEPAHPQDIRTPWTLTRYIWRTEGIRGF 332

  Fly   185 YKGVGATGVRDITFSMVYFPLMAWINDQGP----RKSDGSGEAVF-YWSLIAGLLSGM---TSAF 241
            |:|:.:|.:|::.....:|.     :.:|.    |:.|.|.:.:. ..::|||.:.|:   ||.|
  Fly   333 YRGLSSTFLREMPGYFFFFG-----SYEGTRELLRRDDQSKDDIGPLRTMIAGAIGGVCLWTSTF 392

  Fly   242 MVTPFDVVKTRLQAD--GEKKFKGIMDCVNRTLKEEGISAFFKGGLCRIMVLAP 293
               |.||:|:|:|..  .|..|....|.|.|    ||:.|.::|.|..::...|
  Fly   393 ---PADVIKSRIQVKNLNESMFAVGADIVRR----EGVLALYRGLLPSVLRTIP 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GC2NP_731657.2 Mito_carr 16..106 CDD:395101 29/104 (28%)
Mito_carr 123..203 CDD:395101 25/89 (28%)
Mito_carr 228..302 CDD:395101 24/71 (34%)
CG1628NP_572639.2 Mito_carr 170..252 CDD:395101 24/87 (28%)
Mito_carr 263..364 CDD:395101 29/116 (25%)
Mito_carr 369..456 CDD:395101 24/78 (31%)

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