DRSC/TRiP Functional Genomics Resources

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Protein Alignment GC2 and slc-25A18.1

DIOPT Version :10

Sequence 1:NP_731657.2 Gene:GC2 / 41449 FlyBaseID:FBgn0037970 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_510493.2 Gene:slc-25A18.1 / 181596 WormBaseID:WBGene00008979 Length:313 Species:Caenorhabditis elegans


Alignment Length:313 Identity:172/313 - (54%)
Similarity:219/313 - (69%) Gaps:17/313 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 FNVFPKIINGGVAGIIGVACVYPLDMVKTRLQNQTIGPNGERMYTSIADCFRKTIASEG------ 76
            |:..|||:|||:||||||:||:|:|:|||||||||:|.:|:..|:.||||.::|..|.|      
 Worm     7 FSYGPKIMNGGLAGIIGVSCVFPIDLVKTRLQNQTVGADGKLQYSGIADCAKQTWRSGGASTLAK 71

  Fly    77 YFGMYRGSAVNIVLITPEKAIKLTANDFFRYHLASD-DGVIPLSRATLAGGLAGLFQIVVTTPME 140
            :.|||.||.|||:||||||||||.||||||:.||.: :..:.:.|..|||||||:|||.||||||
 Worm    72 FRGMYSGSGVNILLITPEKAIKLVANDFFRHKLAKEGEKQLSVGRGMLAGGLAGMFQISVTTPME 136

  Fly   141 LLKIQMQDAGRVAAADRAAGREVKTITALGLTKTLLRERGIFGLYKGVGATGVRDITFSMVYFPL 205
            ||||||||.||.....:      :.::|..||..|::|.||..||||:.:|..||:|||::||||
 Worm   137 LLKIQMQDQGRTLKPGQ------QKLSATQLTMKLVKENGIAALYKGLSSTLARDVTFSVIYFPL 195

  Fly   206 MAWINDQGPRKSDGSGEAVFYWSLIAGLLSGMTSAFMVTPFDVVKTRLQ----ADGEKKFKGIMD 266
            .|:::...|||.||||:||||.|.:|||.||..|:|.|||.||:|||:|    ...|..:|.|.|
 Worm   196 FAYLDSLAPRKPDGSGDAVFYGSFLAGLTSGAASSFCVTPLDVIKTRMQTINKGANEIVYKNIPD 260

  Fly   267 CVNRTLKEEGISAFFKGGLCRIMVLAPLFGIAQMFYFLGVGEKILGIERTKSV 319
            ......|.||..|.|||..||:||:||||||||..|::||.||||||::...|
 Worm   261 AFVTIFKNEGPKALFKGAACRMMVMAPLFGIAQTVYYIGVAEKILGIQKATHV 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GC2NP_731657.2 Mito_carr 16..106 CDD:395101 58/93 (62%)
Mito_carr 123..203 CDD:395101 43/79 (54%)
Mito_carr 228..302 CDD:395101 40/77 (52%)
slc-25A18.1NP_510493.2 PTZ00169 3..278 CDD:240302 149/276 (54%)
Mito_carr 215..296 CDD:395101 42/80 (53%)

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