DRSC/TRiP Functional Genomics Resources

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Protein Alignment GC2 and slc-25A18.2

DIOPT Version :9

Sequence 1:NP_731657.2 Gene:GC2 / 41449 FlyBaseID:FBgn0037970 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_501198.1 Gene:slc-25A18.2 / 177518 WormBaseID:WBGene00018901 Length:309 Species:Caenorhabditis elegans


Alignment Length:317 Identity:156/317 - (49%)
Similarity:212/317 - (66%) Gaps:24/317 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 QEQKKPQKFNVFPKIINGGVAGIIGVACVYPLDMVKTRLQNQTIGPNGERMYTSIADCFRKT--I 72
            ||:::.|.....||::|||::||:||:||:|:|:||||||||    .|...||.|||||:|:  .
 Worm    10 QEEREEQPIRYLPKVLNGGISGIVGVSCVFPMDLVKTRLQNQ----KGTSKYTGIADCFKKSWQA 70

  Fly    73 ASEGYF----GMYRGSAVNIVLITPEKAIKLTANDFFRYHLASD-DGVIPLSRATLAGGLAGLFQ 132
            .:.|..    |||:|::|||.||||||||||.||||||:.|..| |..:...|..:||..||..|
 Worm    71 GAPGRLNQIKGMYQGASVNIFLITPEKAIKLVANDFFRHALMKDHDERLSTPRGMIAGASAGFCQ 135

  Fly   133 IVVTTPMELLKIQMQDAGRVAAADRAAGREVKTITALGLTKTLLRERGIFGLYKGVGATGVRDIT 197
            :|:|||||||||:||.     ::|:.  :..|.|..|     |.::.|:..||||:|.|..||::
 Worm   136 VVITTPMELLKIRMQQ-----SSDKV--KATKLIWNL-----LTKDGGVRALYKGLGPTMARDVS 188

  Fly   198 FSMVYFPLMAWINDQGPRKSDGSGEAVFYWSLIAGLLSGMTSAFMVTPFDVVKTRLQADGEKKFK 262
            ||.:||||.|:::..||||.|.||:|||:.|.::||.:|.|::..|||.||||||:|..| ..:.
 Worm   189 FSAMYFPLFAYLDGLGPRKKDDSGDAVFWASFVSGLTAGATASLSVTPLDVVKTRIQTGG-SNYN 252

  Fly   263 GIMDCVNRTLKEEGISAFFKGGLCRIMVLAPLFGIAQMFYFLGVGEKILGIERTKSV 319
            ||.....|.|.:||:.|.|||.:||:||:||||||||..|::|..|||||:|:...|
 Worm   253 GIFHAFYRILADEGVKALFKGAICRMMVMAPLFGIAQTVYYVGSAEKILGLEKGSRV 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GC2NP_731657.2 PTZ00169 14..289 CDD:240302 135/281 (48%)
Mito_carr 16..106 CDD:278578 53/95 (56%)
Mito_carr 123..203 CDD:278578 33/79 (42%)
Mito_carr 228..302 CDD:278578 38/73 (52%)
slc-25A18.2NP_501198.1 Mito_carr 17..114 CDD:278578 55/100 (55%)
PTZ00168 18..277 CDD:185494 132/275 (48%)
Mito_carr 117..200 CDD:278578 39/94 (41%)
Mito_carr 216..292 CDD:278578 39/76 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 128 1.000 Domainoid score I3298
eggNOG 1 0.900 - - E1_KOG0750
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53612
OrthoDB 1 1.010 - - D458796at33208
OrthoFinder 1 1.000 - - FOG0002230
OrthoInspector 1 1.000 - - mtm4728
orthoMCL 1 0.900 - - OOG6_104895
Panther 1 1.100 - - O PTHR45678
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X982
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.790

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