DRSC/TRiP Functional Genomics Resources

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Protein Alignment GC2 and Slc25a20

DIOPT Version :10

Sequence 1:NP_731657.2 Gene:GC2 / 41449 FlyBaseID:FBgn0037970 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_446417.2 Gene:Slc25a20 / 117035 RGDID:621443 Length:301 Species:Rattus norvegicus


Alignment Length:314 Identity:100/314 - (31%)
Similarity:150/314 - (47%) Gaps:37/314 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 KKPQKFNVFPKIINGGVAGIIGVACVYPLDMVKTRLQNQTIG-PNGERMYTSIADCFRKTIASEG 76
            ::|:..:....::.||..|:..|...:|||.||.|||.|... |....||:...||||||:..||
  Rat     3 EEPKPISPLKNLLAGGFGGVCLVFVGHPLDTVKVRLQTQPPSLPGQPPMYSGTIDCFRKTLFREG 67

  Fly    77 YFGMYRGSAVNIVLITPEKAIKLTANDFFRYHLA------SDDGVIPLSRATLAGGLAGLFQIVV 135
            ..|:|||.|..|:.:||..|:     .||.:.|.      |.:..:...:...||.|:|:|...:
  Rat    68 ITGLYRGMAAPIIGVTPMFAV-----CFFGFGLGKRLQQKSPEDELTYPQLFTAGMLSGVFTTGI 127

  Fly   136 TTPMELLKIQMQDAGRVAAADRAAGREVKTITALGLTKTLLRERGIFGLYKGVGATGVRDITFSM 200
            .||.|.:|..:|        .:|:..:.|....|...|.|.:|.||.|.|||...|.:||:..|.
  Rat   128 MTPGERIKCLLQ--------IQASSGKNKYSGTLDCAKKLYQEFGIRGFYKGTVLTLMRDVPASG 184

  Fly   201 VYFPLMAWIND----QGPRKSDGSGEAVFYWSLIAGLLSGMTSAFMVTPFDVVKTRLQADGEKKF 261
            :||....|:.:    ||....|.|...|    |:||..:|:.:..:..|.||:|:|.|.....|:
  Rat   185 MYFMTYEWLKNLFTPQGKSVHDLSVPRV----LVAGGFAGIFNWVVAIPPDVLKSRFQTAPPGKY 245

  Fly   262 -KGIMDCVNRTLKEEGISAFFKGGLCRIMVLA-PLFGIAQMFYFLG--VGEKIL 311
             .|..|.:...::|||:::.:| |...:|:.| |    |....|||  :..|||
  Rat   246 PNGFRDVLRELIREEGVTSLYK-GFNAVMIRAFP----ANAACFLGFEIAMKIL 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GC2NP_731657.2 Mito_carr 16..106 CDD:395101 34/90 (38%)
Mito_carr 123..203 CDD:395101 26/79 (33%)
Mito_carr 228..302 CDD:395101 22/75 (29%)
Slc25a20NP_446417.2 Mito_carr 6..103 CDD:395101 36/101 (36%)
Solcar 1 8..99 36/95 (38%)
Mito_carr 106..198 CDD:395101 29/99 (29%)
Solcar 2 108..196 29/95 (31%)
Mito_carr 206..294 CDD:395101 29/96 (30%)
Solcar 3 207..293 27/94 (29%)

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