DRSC/TRiP Functional Genomics Resources

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Protein Alignment GC2 and Slc25a47

DIOPT Version :9

Sequence 1:NP_731657.2 Gene:GC2 / 41449 FlyBaseID:FBgn0037970 Length:319 Species:Drosophila melanogaster
Sequence 2:XP_011242283.1 Gene:Slc25a47 / 104910 MGIID:2144766 Length:313 Species:Mus musculus


Alignment Length:322 Identity:91/322 - (28%)
Similarity:143/322 - (44%) Gaps:72/322 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 VEQKNQEQKKPQKFNVFPKIINGGVAGIIGVACVYPLDMVKTRLQNQTIGPNGERMYTSIADCFR 69
            :|.::|::::.:              |:.|||..||||.||.|:|.       |..|..|..|.|
Mouse     1 MEDRHQDRQREK--------------GVCGVAVGYPLDTVKVRIQT-------EAKYAGIWHCIR 44

  Fly    70 KTIASEGYFGMYRGSAVNIVLITPEKAIKLTANDFF-----------RYHLASDDGVIPLSRATL 123
            .|...|..:|.|||      |..|...:.|.::..|           |:...|.|.....:..||
Mouse    45 DTYRQERVWGFYRG------LSLPVCTVSLVSSVSFGTYHHCLAHICRFRYGSTDAKPTKADITL 103

  Fly   124 AGGLAGLFQIVVTTPMELLKIQMQDAGRVAAADRAAGRE--------VKTITA-----------L 169
            :|..:||.::.:|:|.|:.|:::|...:.....|.:...        ..|.||           |
Mouse   104 SGCASGLVRVFLTSPTEVAKVRLQTQTQAQTQQRRSSASWTSGAPALCPTPTACLEPRPKYSGPL 168

  Fly   170 GLTKTLLRERGIFGLYKGVGATGVRD----ITFSMVYFPLMAWINDQGPRKSDGSGEAVFYWSLI 230
            ....|:.||.|:.|||||..|..:|:    .|:.:.|..|..|:...|..:.|..|      .|:
Mouse   169 HCLVTVAREEGLRGLYKGSSALLLREGHSFATYFLSYAMLCEWLTPAGHSQPDVLG------VLV 227

  Fly   231 AGLLSGMTSAFMVTPFDVVKTRLQAD--GEKKFKGIMDCVNRTLKEEGISAFFKG---GLCR 287
            ||..:|:.:..:.||.||:|:|||||  |:.:::|::.||..:::|||....|||   ..||
Mouse   228 AGGCAGVLAWAVATPMDVIKSRLQADGQGQHRYRGLLHCVVTSVREEGPRVLFKGLALNCCR 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GC2NP_731657.2 PTZ00169 14..289 CDD:240302 89/313 (28%)
Mito_carr 16..106 CDD:278578 27/100 (27%)
Mito_carr 123..203 CDD:278578 26/102 (25%)
Mito_carr 228..302 CDD:278578 26/65 (40%)
Slc25a47XP_011242283.1 Mito_carr 13..77 CDD:365909 27/76 (36%)
Mito_carr 103..213 CDD:365909 29/109 (27%)
Mito_carr 226..307 CDD:365909 26/64 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0762
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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