DRSC/TRiP Functional Genomics Resources

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Protein Alignment GC2 and LOC100495907

DIOPT Version :10

Sequence 1:NP_731657.2 Gene:GC2 / 41449 FlyBaseID:FBgn0037970 Length:319 Species:Drosophila melanogaster
Sequence 2:XP_002934951.1 Gene:LOC100495907 / 100495907 XenbaseID:XB-GENE-29082879 Length:309 Species:Xenopus tropicalis


Alignment Length:273 Identity:74/273 - (27%)
Similarity:113/273 - (41%) Gaps:34/273 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 VAGII-GVACV---YPLDMVKTRLQNQTIGPNGERMYTSIADCFRKTIASEGYFGMYRGSAVNIV 89
            :||.: |||||   .|.|..|.::|      ....||....||..:|..:||..|:|.|:...:|
 Frog    19 IAGAMGGVACVVSGQPFDTAKVKMQ------TFPTMYRGFVDCAVRTYHAEGLRGLYHGTTPALV 77

  Fly    90 LITPEKAIKLTANDFFRYHLAS------DDGVIPLSRATLAGGLAGLFQIVVTTPMELLKIQMQD 148
            ....|.|:......|.: :|.|      |...:.......||.||.:|..:...|.||:|.::|.
 Frog    78 ANAAENAVLFACYGFCQ-NLVSR
CLGLQDPSQLSDWHKATAGSLASVFSSLALCPTELVKCRIQT 141

  Fly   149 AGRVAAADRAAGREVKTI----TALGLTKTLLRERGIFGLYKGVGATGVRDITFSMVYF---PLM 206
            ...:    |.:|.  |.|    |...:.:.:|...||.||::|:.:|.:|:|.....:|   .|.
 Frog   142 QHEM----RLSGN--KDIPHKSTPWSVVRAILSSEGIPGLFRGLSSTWLREIPGYFFFFGGYELS 200

  Fly   207 AWINDQGPRKSDGSGEAVFYWSLIAGLLSGMTSAFMVTPFDVVKTRLQA-DGEKKFKGIMDCVNR 270
            ..|..|.....|..|..|.   .::|.:.|......|.|.|.||:|:|. ......||.:..:..
 Frog   201 IDILSQRESSKDPPGALVV---TVSGGVGGACFWLAVYPVDSVKSRVQVLTLTPHSKGFIISLLH 262

  Fly   271 TLKEEGISAFFKG 283
            .|:.||....:.|
 Frog   263 ILRTEGFLPLYSG 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GC2NP_731657.2 Mito_carr 16..106 CDD:395101 25/80 (31%)
Mito_carr 123..203 CDD:395101 24/83 (29%)
Mito_carr 228..302 CDD:395101 15/57 (26%)
LOC100495907XP_002934951.1 Mito_carr 14..99 CDD:395101 26/86 (30%)
Mito_carr 107..205 CDD:395101 27/103 (26%)
Mito_carr 231..304 CDD:395101 13/45 (29%)

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