DRSC/TRiP Functional Genomics Resources

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Protein Alignment GC2 and ucp3

DIOPT Version :10

Sequence 1:NP_731657.2 Gene:GC2 / 41449 FlyBaseID:FBgn0037970 Length:319 Species:Drosophila melanogaster
Sequence 2:XP_002942565.1 Gene:ucp3 / 100495495 XenbaseID:XB-GENE-6464668 Length:309 Species:Xenopus tropicalis


Alignment Length:286 Identity:66/286 - (23%)
Similarity:116/286 - (40%) Gaps:34/286 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 KPQKFNVFP--KIINGGVAGIIGVACVYPLDMVKTRLQNQTIGPNGE----RMYTSIADCFRKTI 72
            ||.:....|  |.:..|.|..|.....:|||..|.|||.|..|.:.:    ..|..:....:..:
 Frog     5 KPTEVPPTPLVKFVGAGTAACIADLFTFPLDTAKVRLQIQGEGTSVKDTKVLRYKGVFGTIKTMV 69

  Fly    73 ASEGYFGMYRGSAVNIVLITPEKAIKLTANDFFRYHLASDDGVIPLSRATLAGGLAGLFQIVVTT 137
            .:||...:|.|....:.......:|::...|..:...........::...|||...|...:.:..
 Frog    70 KTEGATSLYNGLVAGLQRQMSFASIRIGLYDSVKQFYCRQSESSGVACRLLAGCTTGAMAVTLAQ 134

  Fly   138 PMELLKIQMQDAGRVAAADRAAGREVKTITALGLTKTLLRERGIFGLYKGVGATGVRD------- 195
            |.:::|::.|...:|...:|   |...|:.|.   ||:.:|.|:.||:||..|...|:       
 Frog   135 PTDVVKVRFQAHIKVMDGER---RYNGTVDAY---KTIAKEEGLRGLWKGTIANITRNAIVNCAE 193

  Fly   196 -ITFSMVYFPLM--AWINDQGPRKSDGSGEAVFYWSLIAGLLSGMTSAFMVTPFDVVKTRLQADG 257
             :|:.::...::  ..:.|..|            ...:|...:|..:..:.:|.||||||.....
 Frog   194 LVTYDLIKETILNQRLMTDNLP------------CHFVAAFGAGFCATVVASPVDVVKTRYMNSP 246

  Fly   258 EKKFKGIMDCVNRTLKEEGISAFFKG 283
            ..::|..::|....|.:||..||:||
 Frog   247 AGQYKNALNCAFIMLVKEGSVAFYKG 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GC2NP_731657.2 Mito_carr 16..106 CDD:395101 21/95 (22%)
Mito_carr 123..203 CDD:395101 23/87 (26%)
Mito_carr 228..302 CDD:395101 18/56 (32%)
ucp3XP_002942565.1 PTZ00169 14..299 CDD:240302 63/277 (23%)
Mito_carr 111..206 CDD:395101 23/100 (23%)

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