DRSC/TRiP Functional Genomics Resources

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Protein Alignment GC2 and ucp1

DIOPT Version :10

Sequence 1:NP_731657.2 Gene:GC2 / 41449 FlyBaseID:FBgn0037970 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_001107354.1 Gene:ucp1 / 100135179 XenbaseID:XB-GENE-963773 Length:309 Species:Xenopus tropicalis


Alignment Length:290 Identity:68/290 - (23%)
Similarity:116/290 - (40%) Gaps:42/290 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 KPQKFNVFP--KIINGGVAGIIGVACVYPLDMVKTRL--QNQTIG---PNGERMYTSIADCFRKT 71
            ||......|  |.|..|.|..|.....:|||..|.||  |.:|.|   .||.| |..:.......
 Frog     5 KPSDVPPTPAVKFIAAGTAACIADLFTFPLDTAKVRLQIQGETTGSGAANGIR-YKGVFGTISTI 68

  Fly    72 IASEGYFGMYRGSAVNIVLITPEKAIKLTANDFFRYHLASDDGVIPLSRATLAGGLAGLFQIVVT 136
            :.:||...:|.|....:.......:|::...|..:....:......:....|||...|...:.|.
 Frog    69 VKTEGPKSLYNGLVAGLQRQMSFASIRIGLYDTVKLFYTNGKEKAGIGSRILAGCTTGALAVTVA 133

  Fly   137 TPMELLKIQMQDAGRVAAADRAAGREVKTITALGLTKTLLRERGIFGLYKGVGATGVRD------ 195
            .|.:::|::.|....:....|   |...|:.|.   ||:.::.|:.||:||......|:      
 Frog   134 QPTDVVKVRFQAQANLQGVKR---RYNGTMDAY---KTIAKKEGVRGLWKGTFPNVTRNAIVNCT 192

  Fly   196 --ITF-----SMVYFPLMAWINDQGPRKSDGSGEAVFYWSLIAGLLSGMTSAFMVTPFDVVKTRL 253
              :|:     :::::.||   .|..|            ...::...:|..:..:.:|.||||||.
 Frog   193 ELVTYDVIKENLLHYKLM---TDNLP------------CHFVSAFGAGFCTTVIASPVDVVKTRY 242

  Fly   254 QADGEKKFKGIMDCVNRTLKEEGISAFFKG 283
            ......::|..::|....:.:||.:||:||
 Frog   243 MNSPPGQYKSALNCAWTMITKEGPTAFYKG 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GC2NP_731657.2 Mito_carr 16..106 CDD:395101 25/96 (26%)
Mito_carr 123..203 CDD:395101 21/92 (23%)
Mito_carr 228..302 CDD:395101 16/56 (29%)
ucp1NP_001107354.1 Mito_carr 10..110 CDD:395101 25/100 (25%)
Mito_carr 111..208 CDD:395101 21/102 (21%)
Mito_carr 211..302 CDD:395101 18/74 (24%)

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