DRSC/TRiP Functional Genomics Resources

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Protein Alignment GC2 and slc25a45

DIOPT Version :9

Sequence 1:NP_731657.2 Gene:GC2 / 41449 FlyBaseID:FBgn0037970 Length:319 Species:Drosophila melanogaster
Sequence 2:XP_012816001.1 Gene:slc25a45 / 100127755 XenbaseID:XB-GENE-1006763 Length:332 Species:Xenopus tropicalis


Alignment Length:309 Identity:82/309 - (26%)
Similarity:131/309 - (42%) Gaps:77/309 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 EQKNQEQKKPQKFNVFPKIINGGVA---GIIGVACVYPLDMVKTRLQNQTIGPNGERMYTSIADC 67
            |.|..:::|           .||.|   .:..:.|   |.:|  |||.|:       .|..|.||
 Frog    43 EGKEGKERK-----------EGGAARKDELEEICC---LSLV--RLQTQS-------RYRGILDC 84

  Fly    68 FRKTIASEGYFGMYR-----------------GSAVNIVLITPEKAIKLTANDFFRYHLASDDGV 115
            ..:|..:|..||.::                 ||..|.:|...::.||...|.....|:      
 Frog    85 VIQTYRNETIFGFFKGMSFPVGSVAISNSLAFGSYSNALLYLSDQEIKNWKNPPHNCHV------ 143

  Fly   116 IPLSRATLAGGLAGLFQIVVTTPMELLKIQMQDA----GRVAAADRAAGREVKTITALGLTKTLL 176
                  .:||..:|:.|:..:.|::|:|:::|:.    |..|   |....:.:....:.....:.
 Frog   144 ------FMAGCFSGIVQLSFSAPVDLVKVRLQNQTESFGNQA---RPGHLQARYQGPVHCAVCIF 199

  Fly   177 RERGIFGLYKGVGATGVRDITFSMVYF----PLMAWINDQGPRKSDGSGEAVFYWS-LIAGLLSG 236
            ||.||||||:|..|..:|||....:||    .|..|:.     ||.....|   |: |.||..:|
 Frog   200 REEGIFGLYRGCLALALRDIPSMGLYFLTYEVLCKWMT-----KSLDEPSA---WTMLFAGGCAG 256

  Fly   237 MTSAFMVTPFDVVKTRLQADGEK--KFKGIMDCVNRTLKEEGISAFFKG 283
            ........|.||:|.|||.||..  ::.|::||:.:::::||:..|.||
 Frog   257 TVGWAFANPMDVIKARLQMDGMHGVQYLGMLDCIRKSIRQEGVKVFLKG 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GC2NP_731657.2 PTZ00169 14..289 CDD:240302 80/301 (27%)
Mito_carr 16..106 CDD:278578 25/109 (23%)
Mito_carr 123..203 CDD:278578 24/83 (29%)
Mito_carr 228..302 CDD:278578 21/59 (36%)
slc25a45XP_012816001.1 Mito_carr <70..128 CDD:278578 17/66 (26%)
Mito_carr 144..240 CDD:278578 29/103 (28%)
Mito_carr 241..332 CDD:278578 23/68 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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