DRSC/TRiP Functional Genomics Resources

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Protein Alignment GC2 and si:dkey-150i13.2

DIOPT Version :10

Sequence 1:NP_731657.2 Gene:GC2 / 41449 FlyBaseID:FBgn0037970 Length:319 Species:Drosophila melanogaster
Sequence 2:XP_073795632.1 Gene:si:dkey-150i13.2 / 100003928 ZFINID:ZDB-GENE-090312-157 Length:609 Species:Danio rerio


Alignment Length:272 Identity:83/272 - (30%)
Similarity:131/272 - (48%) Gaps:38/272 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 INGGVAGIIGVACVYPLDMVKTRLQNQTIGPNGERMYTSIADCFRKTIASEGYFGMYRGSAVNIV 89
            :.||..||..:...:|||.:|.|||.|...     :|....||||||::.||.||:|:|....:.
Zfish    17 VAGGFGGICLLLAGHPLDTIKVRLQTQDCA-----VYKGTFDCFRKTVSKEGIFGLYKGMGAPLA 76

  Fly    90 LITPEKAIKLTANDFFRYHLASD----DGVIP--LSRATLAGGLAGLFQIVVTTPMELLKIQMQD 148
            .:||..|:     :||.:.|..:    |..:|  .::..|||.|||:...|:..|.|.:|..:|.
Zfish    77 GVTPMMAL-----NFFGFGLGKELLQRDPTVPATYTQIYLAGMLAGVCTTVIVAPGERIKCLLQI 136

  Fly   149 ---AGRVAAADRAAGREVKTITALGLTKTLLRERGIFGLYKGVGATGVRDITFSMVYFPLMAWIN 210
               |||           :|....|.....|.:::||..:|||...|.:||:..:.|||....::.
Zfish   137 LPLAGR-----------MKYTGPLDCAVRLYKQQGICSVYKGTILTLIRDVPSNGVYFLTYDYLK 190

  Fly   211 DQGPRKSDGSGEAVFYWS----LIAGLLSGMTSAFMVTPFDVVKTRLQADGEKKFKGIMDCVNRT 271
                ......||.|.:.|    |:||.::||.:..:..|.||:|:..|:..:.:::|:...:...
Zfish   191 ----HYLTPDGECVHHLSTSRVLLAGGIAGMINWLIALPADVLKSNYQSATDGRYQGVRHVLRTL 251

  Fly   272 LKEEGISAFFKG 283
            |||||....:||
Zfish   252 LKEEGAQGLYKG 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GC2NP_731657.2 Mito_carr 16..106 CDD:395101 29/80 (36%)
Mito_carr 123..203 CDD:395101 26/82 (32%)
Mito_carr 228..302 CDD:395101 19/60 (32%)
si:dkey-150i13.2XP_073795632.1 None

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