DRSC/TRiP Functional Genomics Resources

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Protein Alignment GC1 and YEA6

DIOPT Version :10

Sequence 1:NP_650134.1 Gene:GC1 / 41448 FlyBaseID:FBgn0260743 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_010910.1 Gene:YEA6 / 856712 SGDID:S000000732 Length:335 Species:Saccharomyces cerevisiae


Alignment Length:296 Identity:71/296 - (23%)
Similarity:119/296 - (40%) Gaps:39/296 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 PKI--INGGIAGIIGVTCVFPLDLVKTRLQNQ--QIGPNGERMYNSMFDCFRKTYKAEGYFGMYR 83
            |::  |:|.::|.:....|.|.|:.|||||.|  |...:..:.|...|..|...:|.||..|:|:
Yeast    38 PRVAAISGALSGALSAMLVCPFDVAKTRLQAQGLQNMTHQSQHYKGFFGTFATIFKDEGAAGLYK 102

  Fly    84 GSGVNILLITPEKAIKLTANDYFRHKLTTKDGKLPLTSQMVAGGLAGAFQIIVTTPMELLKIQMQ 148
            |....:|...|...|..:..|:.|..........|..|...:...|||...:.|.|:.::|.::.
Yeast   103 GLQPTVLGYIPTLMIYFSVYDFCRKYSVDIFPHSPFLSNASSAITAGAISTVATNPIWVVKTRLM 167

  Fly   149 ---DAGRVAAAAKLAGKTVEKVSATQLASQLIKDKGIFGLYKGI--GATGLRDVTFSIIYFPLFA 208
               ..|:.:...|....|..|:         |:.:|...||.|:  ...|:.:|.   |.|||:.
Yeast   168 LQTGIGKYSTHYKGTIDTFRKI---------IQQEGAKALYAGLVPALLGMLNVA---IQFPLYE 220

  Fly   209 TLNDLGPRRNDGSGEAV----------FWCSFLAGLAAGSTAALAVNPFDVVKTRLQAIKKADGE 263
            .|     :...|..|:.          |....||.:.:...|:....|.::::||:|.  |:|..
Yeast   221 NL-----KIRFGYSESTDVSTDVTSSNFQKLILASMLSKMVASTVTYPHEILRTRMQL--KSDLP 278

  Fly   264 KEF-KGISDCITKTLKHEGPTAFFKGGLCRMIVIAP 298
            ... :.:...|..|.:.||...|:.|....::...|
Yeast   279 NTVQRHLLPLIKITYRQEGFAGFYSGFATNLVRTVP 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GC1NP_650134.1 PTZ00169 37..294 CDD:240302 66/274 (24%)
YEA6NP_010910.1 Mito_carr 43..128 CDD:395101 27/84 (32%)
Mito_carr 135..227 CDD:395101 24/108 (22%)
Mito_carr 240..334 CDD:395101 17/77 (22%)

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