DRSC/TRiP Functional Genomics Resources

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Protein Alignment GC1 and MRX21

DIOPT Version :10

Sequence 1:NP_650134.1 Gene:GC1 / 41448 FlyBaseID:FBgn0260743 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_015336.1 Gene:MRX21 / 856121 SGDID:S000006215 Length:326 Species:Saccharomyces cerevisiae


Alignment Length:326 Identity:85/326 - (26%)
Similarity:147/326 - (45%) Gaps:34/326 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ATIATPLPQP--------QHQQFALLPKIINGGIAGIIGVTCVFPLDLVKTRLQNQQIGPNGERM 61
            |.:.|.|.||        |....|.|.    ||:||.:..|.|.|.:.||..||.|    :....
Yeast     2 AEVLTVLEQPNSIKDFLKQDSNIAFLA----GGVAGAVSRTVVSPFERVKILLQVQ----SSTTS 58

  Fly    62 YN-SMFDCFRKTYKAEGYFGMYRGSGVNILLITPEKAIKLTANDYFRHKLTTKDG-----KLPLT 120
            || .:|...|:.|..||..|::||:|:|.:.|.|..|::....:..:.||...:|     :|..|
Yeast    59 YNRGIFSSIRQVYHEEGTKGLFRGNGLNCIRIFPYSAVQFVVYEACKKKLFHVNGNNGQEQLTNT 123

  Fly   121 SQMVAGGLAGAFQIIVTTPMELLKIQMQ-DAGRVAAAAKLAGKTVEKVSAT-QLASQLIK-DKGI 182
            .::.:|.|.|...::.|.|::|:|.::. ....:::..:...|::.|.... ||.|:..: :.|:
Yeast   124 QRLFSGALCGGCSVVATYPLDLIKTRLSIQTANLSSLNRSKAKSISKPPGIWQLLSETYRLEGGL 188

  Fly   183 FGLYKGIGATGLRDVTFSIIYFPLFATLNDLGPRRNDGSGEAVFWCSFL----AGLAAGSTAALA 243
            .|||:|:..|.|..|.:..:.|.::..|.:.|...:|....   |.|.|    .|..:|..|...
Yeast   189 RGLYRGVWPTSLGVVPYVALNFAVYEQLREFGVNSSDAQPS---WKSNLYKLTIGAISGGVAQTI 250

  Fly   244 VNPFDVVKTRLQAIKKADGEKEFK--GISDCITKTLKHEGPTAFFKGGLCRMIVIAPLFGIAQTV 306
            ..|||:::.|.|.:.....|..|:  .:.|.:....:.||.:.::||....:..:.|...::..|
Yeast   251 TYPFDLLRRRFQVLAMGGNELGFRYTSVWDALVTIGRAEGVSGYYKGLAANLFKVVPSTAVSWLV 315

  Fly   307 Y 307
            |
Yeast   316 Y 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GC1NP_650134.1 PTZ00169 37..294 CDD:240302 70/271 (26%)
MRX21NP_015336.1 PTZ00169 26..304 CDD:240302 75/288 (26%)

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