DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GC1 and YIA6

DIOPT Version :10

Sequence 1:NP_650134.1 Gene:GC1 / 41448 FlyBaseID:FBgn0260743 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_012260.1 Gene:YIA6 / 854811 SGDID:S000001268 Length:373 Species:Saccharomyces cerevisiae


Alignment Length:328 Identity:78/328 - (23%)
Similarity:120/328 - (36%) Gaps:59/328 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SSSATIATPL-----PQPQHQQFALLPKIINGGIAGIIGVTCVFPLDLVKTRLQNQQIGPNGER- 60
            |:.:.|.|.|     |....|..||     :|..||.:....|.|||:.|||||.|.:....|. 
Yeast    58 STESIIGTTLRKKWVPLSSTQITAL-----SGAFAGFLSGVAVCPLDVAKTRLQAQGLQTRFENP 117

  Fly    61 MYNSMFDCFRKTYKAEGYFGMYRGSGVNILLITPEKAIKLTANDY---FRHKLTTKDGKLP---L 119
            .|..:........:.||..|:|:|....:|...|...|..:..::   |.|      |..|   .
Yeast   118 YYRGIMGTLSTIVRDEGPRGLYKGLVPIVLGYFPTWMIYFSVYEFSKKFFH------GIFPQFDF 176

  Fly   120 TSQMVAGGLAGAFQIIVTTPMELLKIQMQDAGRVAAAAKLAGKTVEKVSATQLASQLIKDKGIFG 184
            .:|..|...|||....:|.|:.::|.      |:...:.|...............:|...:|...
Yeast   177 VAQSCAAITAGAASTTLTNPIWVVKT------RLMLQSNLGEHPTHYKGTFDAFRKLFYQEGFKA 235

  Fly   185 LYKGI--GATGLRDVTFSIIYFPLFATLNDLGPR-----RNDGSGEAVFWCSFLAGLAAGSTAAL 242
            ||.|:  ...||..|.   |:||::   .||..|     |.:.:.........:|...:...|:.
Yeast   236 LYAGLVPSLLGLFHVA---IHFPIY---EDLKVRFHCYSRENNTNSINLQRLIMASSVSKMIASA 294

  Fly   243 AVNPFDVVKTRLQAIKKADGEKEFKGISDCITK--------TLKHEGPTAFFKGGLCRMIVIAPL 299
            ...|.::::||:|.  |:|       |.|.|.:        |...||...|:.|....::...|.
Yeast   295 VTYPHEILRTRMQL--KSD-------IPDSIQRRLFPLIKATYAQEGLKGFYSGFTTNLVRTIPA 350

  Fly   300 FGI 302
            ..|
Yeast   351 SAI 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GC1NP_650134.1 PTZ00169 37..294 CDD:240302 65/278 (23%)
YIA6NP_012260.1 Mito_carr 75..171 CDD:395101 29/106 (27%)
Mito_carr 176..268 CDD:395101 24/103 (23%)
Mito_carr 274..365 CDD:395101 18/89 (20%)

Return to query results.
Submit another query.