DRSC/TRiP Functional Genomics Resources

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Protein Alignment GC1 and SFC1

DIOPT Version :10

Sequence 1:NP_650134.1 Gene:GC1 / 41448 FlyBaseID:FBgn0260743 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_012629.1 Gene:SFC1 / 853558 SGDID:S000003856 Length:322 Species:Saccharomyces cerevisiae


Alignment Length:324 Identity:96/324 - (29%)
Similarity:153/324 - (47%) Gaps:52/324 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 IINGGIAGIIGVTCVFPLDLVKTRLQ-------NQQIGPNGERMYNSMFDCFRKT----YKAEGY 78
            ::.||.||:....|..|||.:|.|:|       .:.:.|.|          |.||    |:.||:
Yeast    14 LMAGGTAGLFEALCCHPLDTIKVRMQIYRRVAGIEHVKPPG----------FIKTGRTIYQKEGF 68

  Fly    79 FGMYRGSGVNILLITPEKAIKLTANDYFRHKLTTKDGKLPLT-SQMVAGGLAGAFQ-IIVTTPME 141
            ..:|:|.|..::.|.|:.||:.::.:::|..|..|:..:..| :..|||..||..: ::|..|||
Yeast    69 LALYKGLGAVVIGIIPKMAIRFSSYEFYRTLLVNKESGIVSTGNTFVAGVGAGITEAVLVVNPME 133

  Fly   142 LLKIQMQDAGRVAAAAKLAGKTVEKVSATQLASQLIKDKGIFGLYKGIGATGLRDVTFSIIYFPL 206
            ::||::| |..:..:...||....  :|...|..::|::|:..||:|:..|..|..|.....|.:
Yeast   134 VVKIRLQ-AQHLTPSEPNAGPKYN--NAIHAAYTIVKEEGVSALYRGVSLTAARQATNQGANFTV 195

  Fly   207 FATLN---------DLGPRRNDGSGEAVFWCSFLAGLAAGSTAALAVNPFDVVKTRLQAIKKADG 262
            ::.|.         |:.|.          |.:...||.:|:....:..|.|.:|||||..|....
Yeast   196 YSKLKEFLQNYHQMDVLPS----------WETSCIGLISGAIGPFSNAPLDTIKTRLQKDKSISL 250

  Fly   263 EKEFKGISDCIT---KTLKHEGPTAFFKGGLCRMIVIAPLFGIAQTVYYLGVAEGL--LGYQKK 321
            ||: .|:...||   :.||.||..|.:||...|::.:||...:..|||.. |.|.|  ||..||
Yeast   251 EKQ-SGMKKIITIGAQLLKEEGFRALYKGITPRVMRVAPGQAVTFTVYEY-VREHLENLGIFKK 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GC1NP_650134.1 PTZ00169 37..294 CDD:240302 80/281 (28%)
SFC1NP_012629.1 Mito_carr 6..103 CDD:395101 28/98 (29%)
Mito_carr 108..206 CDD:395101 28/100 (28%)
Mito_carr 210..304 CDD:395101 34/105 (32%)

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