DRSC/TRiP Functional Genomics Resources

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Protein Alignment GC1 and Slc25a45

DIOPT Version :10

Sequence 1:NP_650134.1 Gene:GC1 / 41448 FlyBaseID:FBgn0260743 Length:321 Species:Drosophila melanogaster
Sequence 2:XP_008758401.1 Gene:Slc25a45 / 689625 RGDID:1589953 Length:292 Species:Rattus norvegicus


Alignment Length:274 Identity:76/274 - (27%)
Similarity:120/274 - (43%) Gaps:34/274 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 GGIAGIIGVTCVFPLDLVKTRLQNQQIGPNGERMYNSMFDCFRKTYKAEGYFGMYRGSG------ 86
            |.:.|.:|:....|.|.||.|||.|       ..|..:.||..|||:.|...|.::|..      
  Rat    13 GSVPGAVGLVLGHPFDTVKVRLQTQ-------NTYQGIVDCVVKTYRHESVLGFFKGMSFPIASV 70

  Fly    87 --VNILL--ITPEKAIKLTANDYFRHKLTTKDGKLPLTSQMVAGGLAGAFQIIVTTPMELLKIQM 147
              ||.:|  :.....:.|||..:...:.....    .|:..:||...|..|.....|.:|:|:::
  Rat    71 ALVNSVLFGVYSNTLLALTATSHQERRAQPPS----YTNIFIAGCTGGLLQAYCLAPFDLIKVRL 131

  Fly   148 QDAGRVAAAAKLAGKTVEKVSATQLASQLIKDKGIFGLYKGIGATGLRDVTFSIIYFPLFATL-N 211
            |:  :.....::...|.........|:.::|::|..||::|..|..|||.....:||..:..| .
  Rat   132 QN--QTEPRMQIGSSTPRYRGPVHCAASILKEEGPQGLFRGSWALVLRDTPTLGMYFVTYEGLCR 194

  Fly   212 DLGPRRNDGSGEAVFWCSFLAGLAAGSTAALAVNPFDVVKTRLQAIKKADGEK--EFKGISDCIT 274
            ...|...:.|...|......||:|:..||    .||||:|:|:|    .||.|  ::.|:.||:.
  Rat   195 QYTPEGQNPSSATVLVAGGFAGIASWITA----TPFDVIKSRMQ----MDGLKGRKYGGMLDCMA 251

  Fly   275 KTLKHEGPTAFFKG 288
            .:.:.||...||||
  Rat   252 SSFRQEGIGVFFKG 265

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GC1NP_650134.1 PTZ00169 37..294 CDD:240302 73/265 (28%)
Slc25a45XP_008758401.1 Mito_carr 12..81 CDD:395101 23/74 (31%)
Mito_carr 99..190 CDD:395101 22/96 (23%)
Mito_carr 201..292 CDD:395101 26/73 (36%)

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