DRSC/TRiP Functional Genomics Resources

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Protein Alignment GC1 and Slc25a22

DIOPT Version :9

Sequence 1:NP_001262490.1 Gene:GC1 / 41448 FlyBaseID:FBgn0260743 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_001171047.1 Gene:Slc25a22 / 68267 MGIID:1915517 Length:323 Species:Mus musculus


Alignment Length:319 Identity:190/319 - (59%)
Similarity:233/319 - (73%) Gaps:24/319 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 QQFALLPKIINGGIAGIIGVTCVFPLDLVKTRLQNQQIGPNGERMYNSMFDCFRKTYKAEGYFGM 81
            :|.:|..|:|||||||:||||||||:||.||||||||   ||:|||.||.||..||.::||||||
Mouse     4 KQISLPAKLINGGIAGLIGVTCVFPIDLAKTRLQNQQ---NGQRMYASMSDCLIKTIRSEGYFGM 65

  Fly    82 YRGSGVNILLITPEKAIKLTANDYFRHKLTTKDG-KLPLTSQMVAGGLAGAFQIIVTTPMELLKI 145
            |||:.||:.|:||||||||.|||:|||:| :||| ||.|..:|:||..||..|:|||||||:|||
Mouse    66 YRGAAVNLTLVTPEKAIKLAANDFFRHQL-SKDGQKLTLPKEMLAGCGAGTCQVIVTTPMEMLKI 129

  Fly   146 QMQDAGRVAAAAKL------------AGKTVE-----KVSATQLASQLIKDKGIFGLYKGIGATG 193
            |:|||||:||..|:            |..:||     :.:||||...|:::.||.|||||:|||.
Mouse   130 QLQDAGRIAAQRKILAAQAQLSAQGGAQPSVEAPAPPRPTATQLTRDLLRNHGIAGLYKGLGATL 194

  Fly   194 LRDVTFSIIYFPLFATLNDLGPRRNDGSGEAVFWCSFLAGLAAGSTAALAVNPFDVVKTRLQAIK 258
            ||||.|||:||||||.||.||  |.....::.|:.|||||..|||.||:||||.||||||||:::
Mouse   195 LRDVPFSIVYFPLFANLNQLG--RPSSEEKSPFYVSFLAGCVAGSAAAVAVNPCDVVKTRLQSLE 257

  Fly   259 KADGEKEFKGISDCITKTLKHEGPTAFFKGGLCRMIVIAPLFGIAQTVYYLGVAEGLLG 317
            :...|..:.|..||..|..:||||:||.||..||.:||||||||||.||:||:||.|||
Mouse   258 RGVNEDTYSGFLDCARKIWRHEGPSAFLKGAYCRALVIAPLFGIAQVVYFLGIAESLLG 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GC1NP_001262490.1 Mito_carr 36..113 CDD:278578 54/76 (71%)
Mito_carr 115..213 CDD:278578 62/115 (54%)
Mito_carr 226..307 CDD:278578 48/80 (60%)
Slc25a22NP_001171047.1 PTZ00169 3..289 CDD:240302 169/290 (58%)
Mito_carr 6..96 CDD:365909 65/93 (70%)
Solcar 1 6..93 63/89 (71%)
Solcar 2 101..214 60/112 (54%)
Solcar 3 223..312 52/88 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 137 1.000 Domainoid score I4855
eggNOG 1 0.900 - - E1_KOG0750
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H69383
Inparanoid 1 1.050 354 1.000 Inparanoid score I2232
Isobase 1 0.950 - 0.878984 Normalized mean entropy S1412
OMA 1 1.010 - - QHG53612
OrthoDB 1 1.010 - - D458796at33208
OrthoFinder 1 1.000 - - FOG0002230
OrthoInspector 1 1.000 - - mtm8687
orthoMCL 1 0.900 - - OOG6_104895
Panther 1 1.100 - - O PTHR45678
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X982
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.790

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