DRSC/TRiP Functional Genomics Resources

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Protein Alignment GC1 and slc25a18

DIOPT Version :10

Sequence 1:NP_650134.1 Gene:GC1 / 41448 FlyBaseID:FBgn0260743 Length:321 Species:Drosophila melanogaster
Sequence 2:XP_021326336.1 Gene:slc25a18 / 568740 ZFINID:ZDB-GENE-041111-192 Length:324 Species:Danio rerio


Alignment Length:324 Identity:183/324 - (56%)
Similarity:229/324 - (70%) Gaps:29/324 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 QQFALLPKIINGGIAGIIGVTCVFPLDLVKTRLQNQQIGPNGERMYNSMFDCFRKTYKAEGYFGM 81
            ::.:|..|:||||:||::|||||||:||.||||||||    |.|:|:.|.||..||.|.||||||
Zfish     4 KKLSLPAKLINGGVAGLVGVTCVFPIDLAKTRLQNQQ----GARVYSGMLDCLAKTIKMEGYFGM 64

  Fly    82 YRGSGVNILLITPEKAIKLTANDYFRHKLTTKDGKLPLTSQMVAGGLAGAFQIIVTTPMELLKIQ 146
            |||:.||:.|:||||||||.|||.||.|| :|||||||..:::||..||..|::||||||:||||
Zfish    65 YRGAAVNLTLVTPEKAIKLAANDVFRQKL-SKDGKLPLWGEILAGCGAGTCQVVVTTPMEMLKIQ 128

  Fly   147 MQDAGR------VAAAAKLAGKTVEKV---------------SATQLASQLIKDKGIFGLYKGIG 190
            :|||||      |||:|..:|.|...|               |||::..:|:|.:|:.|||||.|
Zfish   129 LQDAGRLAAQRTVAASAPASGPTPSLVASQTAHPGTSAPPRRSATRITVELLKTRGLRGLYKGAG 193

  Fly   191 ATGLRDVTFSIIYFPLFATLNDLGPRRNDGSGE--AVFWCSFLAGLAAGSTAALAVNPFDVVKTR 253
            ||.:|||.||:|||||||.||.:| |..|...:  |.|..||:||..|||.||:||.|.||:|||
Zfish   194 ATLMRDVPFSMIYFPLFANLNAVG-RAEDCKAQERAPFLQSFMAGCMAGSVAAVAVTPLDVIKTR 257

  Fly   254 LQAIKKADGEKEFKGISDCITKTLKHEGPTAFFKGGLCRMIVIAPLFGIAQTVYYLGVAEGLLG 317
            ||.::|.:||..::||.||..:.||.|||:||.||..||.:||||||||||.||:|||.|.|:|
Zfish   258 LQTLQKGEGEDSYRGIIDCAQRILKREGPSAFLKGATCRALVIAPLFGIAQGVYFLGVGEHLIG 321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GC1NP_650134.1 PTZ00169 37..294 CDD:240302 155/279 (56%)
slc25a18XP_021326336.1 Mito_carr 4..97 CDD:395101 62/97 (64%)
Mito_carr 97..210 CDD:395101 55/112 (49%)
Mito_carr 226..311 CDD:395101 49/84 (58%)

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