DRSC/TRiP Functional Genomics Resources

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Protein Alignment GC1 and slc25a6

DIOPT Version :10

Sequence 1:NP_650134.1 Gene:GC1 / 41448 FlyBaseID:FBgn0260743 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_001122204.1 Gene:slc25a6 / 566370 ZFINID:ZDB-GENE-070912-446 Length:298 Species:Danio rerio


Alignment Length:288 Identity:71/288 - (24%)
Similarity:125/288 - (43%) Gaps:26/288 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 FALLPKIINGGIAGIIGVTCVFPLDLVKTRLQNQQIGP--NGERMYNSMFDCFRKTYKAEGYFGM 81
            |:.....:.||:|..|..|.|.|::.||..||.|....  :.::.|..:.||..:..|.:|:...
Zfish     6 FSFAKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISADKQYKGIVDCIVRIPKEQGFASF 70

  Fly    82 YRGSGVNILLITPEKAIKLTANDYFRHKLTTKDGKLPLTSQ--------MVAGGLAGAFQIIVTT 138
            :||:..|::...|.:|:.....|.::....   |.:...:|        :.:||.|||..:....
Zfish    71 WRGNLANVIRYFPTQALNFAFKDKYKQIFL---GGVDKHTQFWRYFAGNLASGGAAGATSLCFVY 132

  Fly   139 PMELLKIQMQDAGRVAAAAKLAGKTVEKVSATQLASQLIKDKGIFGLYKGIGATGLRDVTFSIIY 203
            |::..:.      |:||....||.|.|........:::.|..|:.|||:|...:....:.:...|
Zfish   133 PLDFART------RLAADVGKAGSTREFSGLADCLAKIFKSDGLRGLYQGFNVSVQGIIIYRAAY 191

  Fly   204 FPLFATLNDLGPRRNDGSGEAVFWCSFLAGLAAGSTAALAVNPFDVVKTR--LQAIKKADGEKEF 266
            |.::.|...:.|   |.....:. .|::......:.|.:...|||.|:.|  :|:.:|. .:..:
Zfish   192 FGVYDTAKGMLP---DPKNTHIM-VSWMIAQTVTAVAGVVSYPFDTVRRRMMMQSGRKG-ADIMY 251

  Fly   267 KGISDCITKTLKHEGPTAFFKGGLCRMI 294
            .|..||..|..:.||..|||||.|..::
Zfish   252 TGTLDCWRKIARDEGSKAFFKGALSNVL 279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GC1NP_650134.1 PTZ00169 37..294 CDD:240302 66/268 (25%)
slc25a6NP_001122204.1 PTZ00169 7..298 CDD:240302 70/287 (24%)

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