DRSC/TRiP Functional Genomics Resources

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Protein Alignment GC1 and slc25a22l

DIOPT Version :9

Sequence 1:NP_001262490.1 Gene:GC1 / 41448 FlyBaseID:FBgn0260743 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_001005430.1 Gene:slc25a22l / 447993 XenbaseID:XB-GENE-1012864 Length:334 Species:Xenopus tropicalis


Alignment Length:326 Identity:181/326 - (55%)
Similarity:229/326 - (70%) Gaps:31/326 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 QQFALLPKIINGGIAGIIGVTCVFPLDLVKTRLQNQQIGPNGERMYNSMFDCFRKTYKAEGYFGM 81
            :|.:|..|:||||:|||||||||||:||.|||||||:   ||:::|.||:||.|||.:::|||||
 Frog     4 KQISLPAKLINGGVAGIIGVTCVFPIDLAKTRLQNQR---NGQQIYKSMWDCLRKTLRSDGYFGM 65

  Fly    82 YRGSGVNILLITPEKAIKLTANDYFRHKLTTKDGKLPLTSQMVAGGLAGAFQIIVTTPMELLKIQ 146
            |||:.||:.|:||||||||.||||||:.|:.....|.|:.:|:||..||..|:|:|||||:||||
 Frog    66 YRGAAVNLTLVTPEKAIKLAANDYFRYHLSKTGSPLTLSKEMLAGCGAGVCQVIITTPMEMLKIQ 130

  Fly   147 MQDAGRVAAAAKLAG--------------------------KTVEKVSATQLASQLIKDKGIFGL 185
            :|||||:||...:.|                          ....||||||:||:|::.:||.||
 Frog   131 LQDAGRLAAQKTVKGIQCMPPGTKHLNTIPVLTRAYNVGPTSAARKVSATQIASELLRTEGIKGL 195

  Fly   186 YKGIGATGLRDVTFSIIYFPLFATLNDLGPRRNDGSGEAVFWCSFLAGLAAGSTAALAVNPFDVV 250
            |||:|||.||||.||:|||||||.||.||...:|  .:|.|..||.||..||||||:||:|.||:
 Frog   196 YKGLGATLLRDVPFSVIYFPLFANLNKLGKASSD--DKAPFLYSFTAGCIAGSTAAVAVSPCDVI 258

  Fly   251 KTRLQAIKKADGEKEFKGISDCITKTLKHEGPTAFFKGGLCRMIVIAPLFGIAQTVYYLGVAEGL 315
            |||||::.|...|:.:.||.:|..|....|||:|||||..||.:||||||||||.||:|||.|.:
 Frog   259 KTRLQSLSKGANEETYSGIVNCARKIWMKEGPSAFFKGAGCRALVIAPLFGIAQVVYFLGVGETV 323

  Fly   316 L 316
            |
 Frog   324 L 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GC1NP_001262490.1 Mito_carr 36..113 CDD:278578 51/76 (67%)
Mito_carr 115..213 CDD:278578 60/123 (49%)
Mito_carr 226..307 CDD:278578 47/80 (59%)
slc25a22lNP_001005430.1 PTZ00169 3..297 CDD:240302 161/297 (54%)
Mito_carr 6..96 CDD:365909 62/92 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 137 1.000 Domainoid score I4849
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 352 1.000 Inparanoid score I2212
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D458796at33208
OrthoFinder 1 1.000 - - FOG0002230
OrthoInspector 1 1.000 - - mtm9333
Panther 1 1.100 - - O PTHR45678
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X982
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.160

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