DRSC/TRiP Functional Genomics Resources

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Protein Alignment GC1 and slc25a40

DIOPT Version :10

Sequence 1:NP_650134.1 Gene:GC1 / 41448 FlyBaseID:FBgn0260743 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_001002360.1 Gene:slc25a40 / 436633 ZFINID:ZDB-GENE-040718-52 Length:353 Species:Danio rerio


Alignment Length:357 Identity:89/357 - (24%)
Similarity:143/357 - (40%) Gaps:87/357 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 ATPLPQPQHQQFALLPKIINGGIAGIIGVTCVFPLDLVKTRLQNQQ------------------- 53
            ::|.|......|..:....:|.|...:.||   |||:||.|||.|:                   
Zfish     6 SSPGPPGDITPFQQMMASCSGAIITSLLVT---PLDVVKIRLQAQKNPFPKGKCFVYCNGLMDHI 67

  Fly    54 -IGPNGERM--------YNSMFDCFRKTYKAEGYFGMYRGSGVNILLITPEKAIKLTANDYFRHK 109
             :..||...        ::...|.|.|..:.||...::.|....:::..|...|..|..|.....
Zfish    68 CVCENGNTKVWYKAPGHFSGTLDAFLKIIRMEGIRSLWSGLPPTLIMAVPATVIYFTCYDQLFAL 132

  Fly   110 LTTKDGKLPLTSQMVAGGLAGAFQIIVTTPMELLKIQMQDAGRVAAAAKLAGKTVEKVSATQLAS 174
            |..|.|.....:.:.||.:|......|.:|:||::.:||.               ||.|..::::
Zfish   133 LKLKMGDRSDLAPLFAGAIARVGSATVISPLELIRTKMQS---------------EKQSYREMSA 182

  Fly   175 QL---IKDKGIFGLYKGIGATGLRDVTFSIIYFPLFATLNDLGPRRNDGSGEAVFW------CS- 229
            .:   :|::|:..|::|.|.|.||||.||.:|:            .|...|:  :|      || 
Zfish   183 VIRSALKNEGLRSLWRGWGPTLLRDVPFSAMYW------------FNYEKGK--WWLCKRYSCSE 233

  Fly   230 ------FLAGLAAGSTAALAVNPFDVVKTRLQAIKKADGEKEFKGISDCIT--------KTLKHE 280
                  |.||..:||.|::...|||||||:.|.   ..||.:...:|..::        :.:...
Zfish   234 PTVAITFTAGALSGSIASIITLPFDVVKTKRQV---EMGELQTMKLSTQVSSSTCSVMKRIVAEN 295

  Fly   281 GPTAFFKGGLCRMIVIAPLFGIAQTVYYLGVA 312
            |.:..|.|.:.|:|.:||...|..:.|..|.|
Zfish   296 GVSGLFAGFMPRLIKVAPACAIMISTYEFGKA 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GC1NP_650134.1 PTZ00169 37..294 CDD:240302 76/308 (25%)
slc25a40NP_001002360.1 Mito_carr 12..129 CDD:395101 26/119 (22%)
Solcar 1 14..132 26/120 (22%)
Solcar 2 140..224 27/112 (24%)
Mito_carr 143..229 CDD:395101 28/114 (25%)
Mito_carr 232..333 CDD:395101 29/99 (29%)
Solcar 3 234..328 28/97 (29%)

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