DRSC/TRiP Functional Genomics Resources

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Protein Alignment GC1 and CG1907

DIOPT Version :10

Sequence 1:NP_650134.1 Gene:GC1 / 41448 FlyBaseID:FBgn0260743 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_651703.1 Gene:CG1907 / 43483 FlyBaseID:FBgn0039674 Length:317 Species:Drosophila melanogaster


Alignment Length:332 Identity:95/332 - (28%)
Similarity:153/332 - (46%) Gaps:42/332 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SATIATPLPQPQHQQFALLPKIINGGIAGIIGVTCVFPLDLVKTRLQNQQIGPNGERMYNSMFDC 68
            |||.....|:......|:  |.:.||::|:.....|.||||||||:|....| :|::.|.|...|
  Fly     2 SATSVQEAPKKAVATNAI--KFLFGGLSGMGATMVVQPLDLVKTRMQISGAG-SGKKEYRSSLHC 63

  Fly    69 FRKTYKAEGYFGMYRGSGVNIL----LITPEKAIKLTANDYFRHKLTTKDGKLPLTSQMVAGGLA 129
            .:.....||...:|:|.|..:|    ..|....:....||.||.|.....|   :|..|..|.:|
  Fly    64 IQTIVSKEGPLALYQGIGAALLRQATYTTGRLGMYTYLNDLFREKFQRSPG---ITDSMAMGTIA 125

  Fly   130 GAFQIIVTTPMELLKIQMQDAGRVAAAAKLAGKTVEKVSATQLA---SQLIKDKGIFGLYKG--- 188
            ||....:.||.|:..::|...||:..|        |:.:.|.:|   :::.:::|:..|::|   
  Fly   126 GACGAFIGTPAEVALVRMTSDGRLPVA--------ERRNYTNVANALARITREEGLTALWRGSLP 182

  Fly   189 -IGATGLRDVTFSIIYFPLFATLNDLGPRRNDGSGEAVFWCSFLAGLAAGSTAALAVNPFDVVKT 252
             :|...:.::| .:..:..|.|....||.:.:...:..|..|.|:||....|:.    |.|:.||
  Fly   183 TVGRAMVVNMT-QLASYSQFKTYFRHGPLQMEEGIKLHFCASMLSGLLTTITSM----PLDIAKT 242

  Fly   253 RLQAIKKADGEKEFKGISDCITKTLKHEGPTAFFKG---GLCRMIVIAPLFGIAQTVYYLGVAEG 314
            |:|.:|..||:.|::|.:|.:.:..:.||..|.:||   ..||   :.|     .||....:.|.
  Fly   243 RIQNMKMVDGKPEYRGTADVLLRVARQEGVFALWKGFTPYYCR---LGP-----HTVLTFIILEQ 299

  Fly   315 L-LGYQK 320
            | .||.|
  Fly   300 LNQGYNK 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GC1NP_650134.1 PTZ00169 37..294 CDD:240302 78/270 (29%)
CG1907NP_651703.1 Mito_carr 16..109 CDD:395101 31/95 (33%)
Mito_carr 118..207 CDD:395101 22/97 (23%)
Mito_carr 219..307 CDD:395101 33/100 (33%)

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