Protein Alignment GC1 and CG4743

DIOPT Version :9

• Sequence 1: NP_001262490.1
• Gene: GC1 / 41448
• FlyBaseID: FBgn0260743
• Length: 321
• Species: Drosophila melanogaster
• Sequence 2: NP_651415.1
• Gene: CG4743 / 43101
• FlyBaseID: FBgn0039357
• Length: 297
• Species: Drosophila melanogaster
• Alignment Length: 278
• Identity: 74/278 - (26%)
• Similarity: 126/278 - (45%)
• Gaps: 70/278 - (25%)

  Fly     2 SSSATIATPLPQPQHQQFALLPKIINGGIAGIIGVTCVFPLDLVKTRLQNQQIGPNGERMYNSMF 66
            |::.::|..:.:|.: :......::.||:||::....:||:|.||||||: ::|
  Fly     9 SAAGSVAIKMQEPVN-KLKFFHALVAGGVAGMVVDIALFPIDTVKTRLQS-ELG----------- 60

  Fly    67 DCFRKTYKAEGYFGMYRGSGVNILLITPEKAIKL-TANDYFRHKLTTKDGKLPLTS--------- 121
                 .::|.|:.|:|:|       :.|..|... ||..:|   .|.:.||..|:|
  Fly    61 -----FWRAGGFRGIYKG-------LAPAAAGSAPTAALFF---CTYECGKQFLSSVTQTKDSPY 110

  Fly   122 -QMVAGGLAGAFQIIVTTPMELLKIQMQDAGRVAAAAKLAGKTVEKVSATQLASQLIKDKGI-FG 184
             .|.|...|.....::..|:|:.|.:.|         .|.|   .|.|..|:..:..:.:|: .|
  Fly   111 VHMAAASAAEVLACLIRVPVEIAKQRSQ---------TLQG---NKQSGLQILLRAYRTEGLKRG 163

  Fly   185 LYKGIGATGLRDVTFSIIYFPL-------FATLNDLGPRRNDGSGEAVFWCSFLA-GLAAGSTAA 241
            ||:|.|:|.:|::.||:|.|||       :..|...     |.:..:|..|..:| |::||.|
  Fly   164 LYRGFGSTIMREIPFSLIQFPLWEYFKLQWTPLTGF-----DSTPFSVALCGAVAGGISAGLT-- 221

  Fly   242 LAVNPFDVVKTRLQAIKK 259
               .|.||||||:...::
  Fly   222 ---TPLDVVKTRIMLAER 236

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
GC1	NP_001262490.1	Mito_carr	36..113	CDD:278578	21/77 (27%)
		Mito_carr	115..213	CDD:278578	31/115 (27%)
		Mito_carr	226..307	CDD:278578	13/35 (37%)
CG4743	NP_651415.1	Mito_carr	23..99	CDD:278578	27/103 (26%)
		PTZ00168	25..281	CDD:185494	71/261 (27%)
		Mito_carr	199..291	CDD:278578	15/48 (31%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45441984
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.930