DRSC/TRiP Functional Genomics Resources

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Protein Alignment GC1 and slc25a30

DIOPT Version :10

Sequence 1:NP_650134.1 Gene:GC1 / 41448 FlyBaseID:FBgn0260743 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_001165746.1 Gene:slc25a30 / 394840 XenbaseID:XB-GENE-995074 Length:291 Species:Xenopus tropicalis


Alignment Length:272 Identity:75/272 - (27%)
Similarity:116/272 - (42%) Gaps:26/272 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 INGGIAGIIGVTCVFPLDLVKTRLQNQQIGPNG---ERMYNSMFDCFRKTYKAEGYFGMYRGSGV 87
            |.||:|.|......||:||.|||||.|....:.   |..|..|.....:.:|.||...:|.|...
 Frog    10 IYGGLASITAECGTFPIDLTKTRLQVQGQANDAKYKEIRYRGMLHAIVRIWKEEGVKALYSGIAP 74

  Fly    88 NILLITPEKAIKLTANDYFRHKLTTKDGKLPLTSQMVAGGLAGAFQIIVTTPMELLKIQMQDAGR 152
            .:|.......||:......:...........|...:..|.|:|.....:..|.::|||:||..|.
 Frog    75 AMLRQASYGTIKIGTYQSLKRLFVDCPEDETLVINVFCGVLSGVVSSCIANPTDVLKIRMQAQGS 139

  Fly   153 VAAAAKLAGKTVEKVSATQLASQLIKDKGIFGLYKGIGATGLRDVTFSIIYFPLFATLNDLGPRR 217
            :.... :.|..:          .:.:.:|..||:||:..|..|......:..|::    |:..:.
 Frog   140 LIQGG-MIGNFI----------NIYQQEGTRGLWKGVSLTAQRAAIVVGVELPVY----DITKKH 189

  Fly   218 ---NDGSGEAVFWCSFLAGLAAGSTAALAVNPFDVVKTRL---QAIKKADGEKEFKGISDCITKT 276
               :...|:.|: ..|||....|...|||.||.|||:||:   ::|:.. ....:||..||:.:|
 Frog   190 LILSGLMGDTVY-THFLASFTCGLAGALASNPVDVVRTRMMNQRSIRNV-SNSSYKGTLDCLLQT 252

  Fly   277 LKHEGPTAFFKG 288
            .|:||..|.:||
 Frog   253 WKNEGFFALYKG 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GC1NP_650134.1 PTZ00169 37..294 CDD:240302 70/261 (27%)
slc25a30NP_001165746.1 Solcar 1 7..96 26/85 (31%)
PTZ00169 9..289 CDD:240302 75/272 (28%)
Solcar 2 104..189 21/99 (21%)
Solcar 3 198..289 27/69 (39%)

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