DRSC/TRiP Functional Genomics Resources

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Protein Alignment GC1 and Slc25a13

DIOPT Version :10

Sequence 1:NP_650134.1 Gene:GC1 / 41448 FlyBaseID:FBgn0260743 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_001406553.1 Gene:Slc25a13 / 362322 RGDID:1565889 Length:676 Species:Rattus norvegicus


Alignment Length:289 Identity:124/289 - (42%)
Similarity:173/289 - (59%) Gaps:28/289 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 GGIAGIIGVTCVFPLDLVKTRLQNQQIGPN--GERMYNSMFDCFRKTYKAEGYFGMYRGSGVNIL 90
            |.|||.:|.|.|:|:||||||:|||:...:  ||.||.:.||||:|..:.||:||:|||....:|
  Rat   336 GSIAGAVGATAVYPIDLVKTRMQNQRSTGSFVGELMYKNSFDCFKKVLRYEGFFGLYRGLLPQLL 400

  Fly    91 LITPEKAIKLTANDYFRHKLTTKDGKLPLTSQMVAGGLAGAFQIIVTTPMELLKIQMQDAGRVAA 155
            .:.||||||||.||:.|.|...|||.:||.:::.|||.||..|:|.|.|:|::||::|.||.:..
  Rat   401 GVAPEKAIKLTVNDFVRDKFMHKDGSVPLLAEIFAGGCAGGSQVIFTNPLEIVKIRLQVAGEITT 465

  Fly   156 AAKLAGKTVEKVSATQLASQLIKDKGIFGLYKGIGATGLRDVTFSIIYFPLFATL-----NDLGP 215
            ..:::            |..:::|.|.||:|||..|..|||:.||.||||.:|.:     |:.| 
  Rat   466 GPRVS------------ALSVVRDLGFFGIYKGAKACFLRDIPFSAIYFPCYAHVKASFANEDG- 517

  Fly   216 RRNDGSGEAVFWCSFLAGLAAGSTAALAVNPFDVVKTRLQAIKKADGEKEFKGISDCITKTLKHE 280
            :.:.||       ..|||..||..||..|.|.||:|||||...:| |:..:.|::||..|.|:.|
  Rat   518 QVSPGS-------LLLAGAIAGMPAASLVTPADVIKTRLQVAARA-GQTTYSGVTDCFRKILREE 574

  Fly   281 GPTAFFKGGLCRMIVIAPLFGIAQTVYYL 309
            ||.|.:||...|:...:|.||:....|.|
  Rat   575 GPKALWKGAGARVFRSSPQFGVTLLTYEL 603

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GC1NP_650134.1 PTZ00169 37..294 CDD:240302 114/263 (43%)
Slc25a13NP_001406553.1 Regulatory N-terminal domain. /evidence=ECO:0000250|UniProtKB:Q9UJS0 2..295
EF-hand_7 18..81 CDD:463900
EFh_PEF <56..183 CDD:355382
EF-hand motif 57..83 CDD:320060
EF-hand motif 84..126 CDD:320060
EF-hand motif 133..159 CDD:320060
Linker loop domain. /evidence=ECO:0000250|UniProtKB:O75746 296..312
Carrier domain. /evidence=ECO:0000250|UniProtKB:Q9UJS0 322..613 124/289 (43%)
Mito_carr 330..423 CDD:395101 46/86 (53%)
Mito_carr 425..512 CDD:395101 37/98 (38%)
Mito_carr 517..609 CDD:395101 38/96 (40%)
C-terminal domain. /evidence=ECO:0000250|UniProtKB:Q9UJS0 614..676
Blue background indicates that the domain is not in the aligned region.

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